Gene : Medtr6g006970 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11229 - 50S RIBOSOMAL PROTEIN L3 Description:  50S ribosomal protein L3P
Genomic Order:  182 Name:  ? Medtr6g006970
Secondary Identifier:  ? PAC:31103097
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g006970 0.5kb upstream 0.5kb upstream 6477 true chr6: 1310518-1316994 Medicago truncatula
Medtr6g006970 0.5kb upstream 0.5kb upstream 500 false chr6: 1316495-1316994 Medicago truncatula
Medtr6g006970 0.5kb downstream 0.5kb downstream 6477 true chr6: 1310018-1316494 Medicago truncatula
Medtr6g006970 0.5kb downstream 0.5kb downstream 500 false chr6: 1310018-1310517 Medicago truncatula
Medtr6g006970 1.0kb upstream 1.0kb upstream 6977 true chr6: 1310518-1317494 Medicago truncatula
Medtr6g006970 1.0kb upstream 1.0kb upstream 1000 false chr6: 1316495-1317494 Medicago truncatula
Medtr6g006970 1.0kb downstream 1.0kb downstream 6977 true chr6: 1309518-1316494 Medicago truncatula
Medtr6g006970 1.0kb downstream 1.0kb downstream 1000 false chr6: 1309518-1310517 Medicago truncatula
Medtr6g006970 2.0kb upstream 2.0kb upstream 7977 true chr6: 1310518-1318494 Medicago truncatula
Medtr6g006970 2.0kb upstream 2.0kb upstream 2000 false chr6: 1316495-1318494 Medicago truncatula
Medtr6g006970 2.0kb downstream 2.0kb downstream 7977 true chr6: 1308518-1316494 Medicago truncatula
Medtr6g006970 2.0kb downstream 2.0kb downstream 2000 false chr6: 1308518-1310517 Medicago truncatula
Medtr6g006970 5.0kb upstream 5.0kb upstream 10977 true chr6: 1310518-1321494 Medicago truncatula
Medtr6g006970 5.0kb upstream 5.0kb upstream 5000 false chr6: 1316495-1321494 Medicago truncatula
Medtr6g006970 5.0kb downstream 5.0kb downstream 10977 true chr6: 1305518-1316494 Medicago truncatula
Medtr6g006970 5.0kb downstream 5.0kb downstream 5000 false chr6: 1305518-1310517 Medicago truncatula
Medtr6g006970 10.0kb upstream 10.0kb upstream 15977 true chr6: 1310518-1326494 Medicago truncatula
Medtr6g006970 10.0kb upstream 10.0kb upstream 10000 false chr6: 1316495-1326494 Medicago truncatula
Medtr6g006970 10.0kb downstream 10.0kb downstream 15977 true chr6: 1300518-1316494 Medicago truncatula
Medtr6g006970 10.0kb downstream 10.0kb downstream 10000 false chr6: 1300518-1310517 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122305263 5265 Fabidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.581        
cufflinks 0.902        
cufflinks 1.31        
cufflinks 1.388        
cufflinks 2.648       High
cufflinks 0.207       Low
cufflinks 1.383        
cufflinks 0.997        
cufflinks 2.684       High

0 Strain