Gene : Medtr6g006950 M. truncatula Mt4.0v1
Defline:  (1 of 11) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Description:  DUF1645 family protein
Genomic Order:  181 Name:  ? Medtr6g006950
Secondary Identifier:  ? PAC:31104515
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g006950 0.5kb upstream 0.5kb upstream 1391 true chr6: 1303270-1304660 Medicago truncatula
Medtr6g006950 0.5kb upstream 0.5kb upstream 500 false chr6: 1303270-1303769 Medicago truncatula
Medtr6g006950 0.5kb downstream 0.5kb downstream 1391 true chr6: 1303770-1305160 Medicago truncatula
Medtr6g006950 0.5kb downstream 0.5kb downstream 500 false chr6: 1304661-1305160 Medicago truncatula
Medtr6g006950 1.0kb upstream 1.0kb upstream 1891 true chr6: 1302770-1304660 Medicago truncatula
Medtr6g006950 1.0kb upstream 1.0kb upstream 1000 false chr6: 1302770-1303769 Medicago truncatula
Medtr6g006950 1.0kb downstream 1.0kb downstream 1891 true chr6: 1303770-1305660 Medicago truncatula
Medtr6g006950 1.0kb downstream 1.0kb downstream 1000 false chr6: 1304661-1305660 Medicago truncatula
Medtr6g006950 2.0kb upstream 2.0kb upstream 2891 true chr6: 1301770-1304660 Medicago truncatula
Medtr6g006950 2.0kb upstream 2.0kb upstream 2000 false chr6: 1301770-1303769 Medicago truncatula
Medtr6g006950 2.0kb downstream 2.0kb downstream 2891 true chr6: 1303770-1306660 Medicago truncatula
Medtr6g006950 2.0kb downstream 2.0kb downstream 2000 false chr6: 1304661-1306660 Medicago truncatula
Medtr6g006950 5.0kb upstream 5.0kb upstream 5891 true chr6: 1298770-1304660 Medicago truncatula
Medtr6g006950 5.0kb upstream 5.0kb upstream 5000 false chr6: 1298770-1303769 Medicago truncatula
Medtr6g006950 5.0kb downstream 5.0kb downstream 5891 true chr6: 1303770-1309660 Medicago truncatula
Medtr6g006950 5.0kb downstream 5.0kb downstream 5000 false chr6: 1304661-1309660 Medicago truncatula
Medtr6g006950 10.0kb upstream 10.0kb upstream 10891 true chr6: 1293770-1304660 Medicago truncatula
Medtr6g006950 10.0kb upstream 10.0kb upstream 10000 false chr6: 1293770-1303769 Medicago truncatula
Medtr6g006950 10.0kb downstream 10.0kb downstream 10891 true chr6: 1303770-1314660 Medicago truncatula
Medtr6g006950 10.0kb downstream 10.0kb downstream 10000 false chr6: 1304661-1314660 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313553 5265 Fabidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.016        
cufflinks 0.281        
cufflinks 0.227       Low
cufflinks 2.981        
cufflinks 0.344        
cufflinks 7.744        
cufflinks 25.276     High High
cufflinks 0.232       Low
cufflinks 33.152     High High

0 Strain