Gene : Medtr6g006990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED Description:  carbonic anhydrase family protein
Genomic Order:  183 Name:  ? Medtr6g006990
Secondary Identifier:  ? PAC:31102471
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g006990 0.5kb upstream 0.5kb upstream 4832 true chr6: 1321630-1326461 Medicago truncatula
Medtr6g006990 0.5kb upstream 0.5kb upstream 500 false chr6: 1321630-1322129 Medicago truncatula
Medtr6g006990 0.5kb downstream 0.5kb downstream 4832 true chr6: 1322130-1326961 Medicago truncatula
Medtr6g006990 0.5kb downstream 0.5kb downstream 500 false chr6: 1326462-1326961 Medicago truncatula
Medtr6g006990 1.0kb upstream 1.0kb upstream 5332 true chr6: 1321130-1326461 Medicago truncatula
Medtr6g006990 1.0kb upstream 1.0kb upstream 1000 false chr6: 1321130-1322129 Medicago truncatula
Medtr6g006990 1.0kb downstream 1.0kb downstream 5332 true chr6: 1322130-1327461 Medicago truncatula
Medtr6g006990 1.0kb downstream 1.0kb downstream 1000 false chr6: 1326462-1327461 Medicago truncatula
Medtr6g006990 2.0kb upstream 2.0kb upstream 6332 true chr6: 1320130-1326461 Medicago truncatula
Medtr6g006990 2.0kb upstream 2.0kb upstream 2000 false chr6: 1320130-1322129 Medicago truncatula
Medtr6g006990 2.0kb downstream 2.0kb downstream 6332 true chr6: 1322130-1328461 Medicago truncatula
Medtr6g006990 2.0kb downstream 2.0kb downstream 2000 false chr6: 1326462-1328461 Medicago truncatula
Medtr6g006990 5.0kb upstream 5.0kb upstream 9332 true chr6: 1317130-1326461 Medicago truncatula
Medtr6g006990 5.0kb upstream 5.0kb upstream 5000 false chr6: 1317130-1322129 Medicago truncatula
Medtr6g006990 5.0kb downstream 5.0kb downstream 9332 true chr6: 1322130-1331461 Medicago truncatula
Medtr6g006990 5.0kb downstream 5.0kb downstream 5000 false chr6: 1326462-1331461 Medicago truncatula
Medtr6g006990 10.0kb upstream 10.0kb upstream 14332 true chr6: 1312130-1326461 Medicago truncatula
Medtr6g006990 10.0kb upstream 10.0kb upstream 10000 false chr6: 1312130-1322129 Medicago truncatula
Medtr6g006990 10.0kb downstream 10.0kb downstream 14332 true chr6: 1322130-1336461 Medicago truncatula
Medtr6g006990 10.0kb downstream 10.0kb downstream 10000 false chr6: 1326462-1336461 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303950 5265 Fabidae View MSA
124067847 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 304.287     High  
cufflinks 131.561     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 148.906     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 255.216     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain