Gene : Medtr6g009200 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR24221:SF141 - ABC TRANSPORTER B FAMILY MEMBER 15-RELATED Description:  ABC transporter B family protein
Genomic Order:  350 Name:  ? Medtr6g009200
Secondary Identifier:  ? PAC:31105559
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g009200 0.5kb upstream 0.5kb upstream 9227 true chr6: 2671521-2680747 Medicago truncatula
Medtr6g009200 0.5kb upstream 0.5kb upstream 500 false chr6: 2680248-2680747 Medicago truncatula
Medtr6g009200 0.5kb downstream 0.5kb downstream 9227 true chr6: 2671021-2680247 Medicago truncatula
Medtr6g009200 0.5kb downstream 0.5kb downstream 500 false chr6: 2671021-2671520 Medicago truncatula
Medtr6g009200 1.0kb upstream 1.0kb upstream 9727 true chr6: 2671521-2681247 Medicago truncatula
Medtr6g009200 1.0kb upstream 1.0kb upstream 1000 false chr6: 2680248-2681247 Medicago truncatula
Medtr6g009200 1.0kb downstream 1.0kb downstream 9727 true chr6: 2670521-2680247 Medicago truncatula
Medtr6g009200 1.0kb downstream 1.0kb downstream 1000 false chr6: 2670521-2671520 Medicago truncatula
Medtr6g009200 2.0kb upstream 2.0kb upstream 10727 true chr6: 2671521-2682247 Medicago truncatula
Medtr6g009200 2.0kb upstream 2.0kb upstream 2000 false chr6: 2680248-2682247 Medicago truncatula
Medtr6g009200 2.0kb downstream 2.0kb downstream 10727 true chr6: 2669521-2680247 Medicago truncatula
Medtr6g009200 2.0kb downstream 2.0kb downstream 2000 false chr6: 2669521-2671520 Medicago truncatula
Medtr6g009200 5.0kb upstream 5.0kb upstream 13727 true chr6: 2671521-2685247 Medicago truncatula
Medtr6g009200 5.0kb upstream 5.0kb upstream 5000 false chr6: 2680248-2685247 Medicago truncatula
Medtr6g009200 5.0kb downstream 5.0kb downstream 13727 true chr6: 2666521-2680247 Medicago truncatula
Medtr6g009200 5.0kb downstream 5.0kb downstream 5000 false chr6: 2666521-2671520 Medicago truncatula
Medtr6g009200 10.0kb upstream 10.0kb upstream 18727 true chr6: 2671521-2690247 Medicago truncatula
Medtr6g009200 10.0kb upstream 10.0kb upstream 10000 false chr6: 2680248-2690247 Medicago truncatula
Medtr6g009200 10.0kb downstream 10.0kb downstream 18727 true chr6: 2661521-2680247 Medicago truncatula
Medtr6g009200 10.0kb downstream 10.0kb downstream 10000 false chr6: 2661521-2671520 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310671 5265 Fabidae View MSA
124072133 5270 Rosid View MSA
123745153 5271 Pentapetalae View MSA
122796432 5272 Eudicot View MSA
122043732 5273 Angiosperm View MSA
121347881 5274 Embryophyte View MSA
123380663 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16       Low
cufflinks 0.366        
cufflinks 0.308        
cufflinks 0.544        
cufflinks 0.375        
cufflinks 0.596        
cufflinks 1.833       High
cufflinks 0.159       Low
cufflinks 1.629       High

0 Strain