Gene : Medtr6g008970 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF08295 - Sin3 family co-repressor (Sin3_corepress) Description:  paired amphipathic helix SIN3-like protein
Genomic Order:  331 Name:  ? Medtr6g008970
Secondary Identifier:  ? PAC:31101974
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g008970 0.5kb upstream 0.5kb upstream 9959 true chr6: 2526712-2536670 Medicago truncatula
Medtr6g008970 0.5kb upstream 0.5kb upstream 500 false chr6: 2536171-2536670 Medicago truncatula
Medtr6g008970 0.5kb downstream 0.5kb downstream 9959 true chr6: 2526212-2536170 Medicago truncatula
Medtr6g008970 0.5kb downstream 0.5kb downstream 500 false chr6: 2526212-2526711 Medicago truncatula
Medtr6g008970 1.0kb upstream 1.0kb upstream 10459 true chr6: 2526712-2537170 Medicago truncatula
Medtr6g008970 1.0kb upstream 1.0kb upstream 1000 false chr6: 2536171-2537170 Medicago truncatula
Medtr6g008970 1.0kb downstream 1.0kb downstream 10459 true chr6: 2525712-2536170 Medicago truncatula
Medtr6g008970 1.0kb downstream 1.0kb downstream 1000 false chr6: 2525712-2526711 Medicago truncatula
Medtr6g008970 2.0kb upstream 2.0kb upstream 11459 true chr6: 2526712-2538170 Medicago truncatula
Medtr6g008970 2.0kb upstream 2.0kb upstream 2000 false chr6: 2536171-2538170 Medicago truncatula
Medtr6g008970 2.0kb downstream 2.0kb downstream 11459 true chr6: 2524712-2536170 Medicago truncatula
Medtr6g008970 2.0kb downstream 2.0kb downstream 2000 false chr6: 2524712-2526711 Medicago truncatula
Medtr6g008970 5.0kb upstream 5.0kb upstream 14459 true chr6: 2526712-2541170 Medicago truncatula
Medtr6g008970 5.0kb upstream 5.0kb upstream 5000 false chr6: 2536171-2541170 Medicago truncatula
Medtr6g008970 5.0kb downstream 5.0kb downstream 14459 true chr6: 2521712-2536170 Medicago truncatula
Medtr6g008970 5.0kb downstream 5.0kb downstream 5000 false chr6: 2521712-2526711 Medicago truncatula
Medtr6g008970 10.0kb upstream 10.0kb upstream 19459 true chr6: 2526712-2546170 Medicago truncatula
Medtr6g008970 10.0kb upstream 10.0kb upstream 10000 false chr6: 2536171-2546170 Medicago truncatula
Medtr6g008970 10.0kb downstream 10.0kb downstream 19459 true chr6: 2516712-2536170 Medicago truncatula
Medtr6g008970 10.0kb downstream 10.0kb downstream 10000 false chr6: 2516712-2526711 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308995 5265 Fabidae View MSA
124072493 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.786     High High
cufflinks 14.932     High  
cufflinks 17.123     High  
cufflinks 3.944       Low
cufflinks 16.059     High  
cufflinks 7.173        
cufflinks 15.386     High  
cufflinks 13.476     High  
cufflinks 9.289        

0 Strain