Gene : Medtr6g008820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF05783 - Dynein light intermediate chain (DLIC) (DLIC) Description:  ABC transporter B family-like protein
Genomic Order:  322 Name:  ? Medtr6g008820
Secondary Identifier:  ? PAC:31104091
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g008820 0.5kb upstream 0.5kb upstream 6699 true chr6: 2445102-2451800 Medicago truncatula
Medtr6g008820 0.5kb upstream 0.5kb upstream 500 false chr6: 2445102-2445601 Medicago truncatula
Medtr6g008820 0.5kb downstream 0.5kb downstream 6699 true chr6: 2445602-2452300 Medicago truncatula
Medtr6g008820 0.5kb downstream 0.5kb downstream 500 false chr6: 2451801-2452300 Medicago truncatula
Medtr6g008820 1.0kb upstream 1.0kb upstream 7199 true chr6: 2444602-2451800 Medicago truncatula
Medtr6g008820 1.0kb upstream 1.0kb upstream 1000 false chr6: 2444602-2445601 Medicago truncatula
Medtr6g008820 1.0kb downstream 1.0kb downstream 7199 true chr6: 2445602-2452800 Medicago truncatula
Medtr6g008820 1.0kb downstream 1.0kb downstream 1000 false chr6: 2451801-2452800 Medicago truncatula
Medtr6g008820 2.0kb upstream 2.0kb upstream 8199 true chr6: 2443602-2451800 Medicago truncatula
Medtr6g008820 2.0kb upstream 2.0kb upstream 2000 false chr6: 2443602-2445601 Medicago truncatula
Medtr6g008820 2.0kb downstream 2.0kb downstream 8199 true chr6: 2445602-2453800 Medicago truncatula
Medtr6g008820 2.0kb downstream 2.0kb downstream 2000 false chr6: 2451801-2453800 Medicago truncatula
Medtr6g008820 5.0kb upstream 5.0kb upstream 11199 true chr6: 2440602-2451800 Medicago truncatula
Medtr6g008820 5.0kb upstream 5.0kb upstream 5000 false chr6: 2440602-2445601 Medicago truncatula
Medtr6g008820 5.0kb downstream 5.0kb downstream 11199 true chr6: 2445602-2456800 Medicago truncatula
Medtr6g008820 5.0kb downstream 5.0kb downstream 5000 false chr6: 2451801-2456800 Medicago truncatula
Medtr6g008820 10.0kb upstream 10.0kb upstream 16199 true chr6: 2435602-2451800 Medicago truncatula
Medtr6g008820 10.0kb upstream 10.0kb upstream 10000 false chr6: 2435602-2445601 Medicago truncatula
Medtr6g008820 10.0kb downstream 10.0kb downstream 16199 true chr6: 2445602-2461800 Medicago truncatula
Medtr6g008820 10.0kb downstream 10.0kb downstream 10000 false chr6: 2451801-2461800 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783722 5273 Angiosperm View MSA
122265863 5265 Fabidae Singleton cluster - no MSA
124006893 5270 Rosid Singleton cluster - no MSA
123755429 5271 Pentapetalae View MSA
122776687 5272 Eudicot View MSA
121055170 5274 Embryophyte View MSA
123095115 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low High

0 Strain