Gene : Medtr6g007603 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF511 - SERINE-THREONINE PROTEIN KINASE Description:  Serine/Threonine-kinase HT1-like protein
Genomic Order:  227 Name:  ? Medtr6g007603
Secondary Identifier:  ? PAC:31105717
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007603 0.5kb upstream 0.5kb upstream 5202 true chr6: 1662670-1667871 Medicago truncatula
Medtr6g007603 0.5kb upstream 0.5kb upstream 500 false chr6: 1662670-1663169 Medicago truncatula
Medtr6g007603 0.5kb downstream 0.5kb downstream 5202 true chr6: 1663170-1668371 Medicago truncatula
Medtr6g007603 0.5kb downstream 0.5kb downstream 500 false chr6: 1667872-1668371 Medicago truncatula
Medtr6g007603 1.0kb upstream 1.0kb upstream 5702 true chr6: 1662170-1667871 Medicago truncatula
Medtr6g007603 1.0kb upstream 1.0kb upstream 1000 false chr6: 1662170-1663169 Medicago truncatula
Medtr6g007603 1.0kb downstream 1.0kb downstream 5702 true chr6: 1663170-1668871 Medicago truncatula
Medtr6g007603 1.0kb downstream 1.0kb downstream 1000 false chr6: 1667872-1668871 Medicago truncatula
Medtr6g007603 2.0kb upstream 2.0kb upstream 6702 true chr6: 1661170-1667871 Medicago truncatula
Medtr6g007603 2.0kb upstream 2.0kb upstream 2000 false chr6: 1661170-1663169 Medicago truncatula
Medtr6g007603 2.0kb downstream 2.0kb downstream 6702 true chr6: 1663170-1669871 Medicago truncatula
Medtr6g007603 2.0kb downstream 2.0kb downstream 2000 false chr6: 1667872-1669871 Medicago truncatula
Medtr6g007603 5.0kb upstream 5.0kb upstream 9702 true chr6: 1658170-1667871 Medicago truncatula
Medtr6g007603 5.0kb upstream 5.0kb upstream 5000 false chr6: 1658170-1663169 Medicago truncatula
Medtr6g007603 5.0kb downstream 5.0kb downstream 9702 true chr6: 1663170-1672871 Medicago truncatula
Medtr6g007603 5.0kb downstream 5.0kb downstream 5000 false chr6: 1667872-1672871 Medicago truncatula
Medtr6g007603 10.0kb upstream 10.0kb upstream 14702 true chr6: 1653170-1667871 Medicago truncatula
Medtr6g007603 10.0kb upstream 10.0kb upstream 10000 false chr6: 1653170-1663169 Medicago truncatula
Medtr6g007603 10.0kb downstream 10.0kb downstream 14702 true chr6: 1663170-1677871 Medicago truncatula
Medtr6g007603 10.0kb downstream 10.0kb downstream 10000 false chr6: 1667872-1677871 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304545 5265 Fabidae View MSA
124069596 5270 Rosid View MSA
123751739 5271 Pentapetalae View MSA
122795785 5272 Eudicot View MSA
122041918 5273 Angiosperm View MSA
121348422 5274 Embryophyte View MSA
123380860 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.287       High
cufflinks 3.601        
cufflinks 3.471        
cufflinks 0.903       Low
cufflinks 3.75        
cufflinks 0.838       Low
cufflinks 5.567        
cufflinks 3.604        
cufflinks 1.925        

0 Strain