Gene : Medtr6g009520 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  371 Name:  ? Medtr6g009520
Secondary Identifier:  ? PAC:31104286
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g009520 0.5kb upstream 0.5kb upstream 2339 true chr6: 2832401-2834739 Medicago truncatula
Medtr6g009520 0.5kb upstream 0.5kb upstream 500 false chr6: 2834240-2834739 Medicago truncatula
Medtr6g009520 0.5kb downstream 0.5kb downstream 2339 true chr6: 2831901-2834239 Medicago truncatula
Medtr6g009520 0.5kb downstream 0.5kb downstream 500 false chr6: 2831901-2832400 Medicago truncatula
Medtr6g009520 1.0kb upstream 1.0kb upstream 2839 true chr6: 2832401-2835239 Medicago truncatula
Medtr6g009520 1.0kb upstream 1.0kb upstream 1000 false chr6: 2834240-2835239 Medicago truncatula
Medtr6g009520 1.0kb downstream 1.0kb downstream 2839 true chr6: 2831401-2834239 Medicago truncatula
Medtr6g009520 1.0kb downstream 1.0kb downstream 1000 false chr6: 2831401-2832400 Medicago truncatula
Medtr6g009520 2.0kb upstream 2.0kb upstream 3839 true chr6: 2832401-2836239 Medicago truncatula
Medtr6g009520 2.0kb upstream 2.0kb upstream 2000 false chr6: 2834240-2836239 Medicago truncatula
Medtr6g009520 2.0kb downstream 2.0kb downstream 3839 true chr6: 2830401-2834239 Medicago truncatula
Medtr6g009520 2.0kb downstream 2.0kb downstream 2000 false chr6: 2830401-2832400 Medicago truncatula
Medtr6g009520 5.0kb upstream 5.0kb upstream 6839 true chr6: 2832401-2839239 Medicago truncatula
Medtr6g009520 5.0kb upstream 5.0kb upstream 5000 false chr6: 2834240-2839239 Medicago truncatula
Medtr6g009520 5.0kb downstream 5.0kb downstream 6839 true chr6: 2827401-2834239 Medicago truncatula
Medtr6g009520 5.0kb downstream 5.0kb downstream 5000 false chr6: 2827401-2832400 Medicago truncatula
Medtr6g009520 10.0kb upstream 10.0kb upstream 11839 true chr6: 2832401-2844239 Medicago truncatula
Medtr6g009520 10.0kb upstream 10.0kb upstream 10000 false chr6: 2834240-2844239 Medicago truncatula
Medtr6g009520 10.0kb downstream 10.0kb downstream 11839 true chr6: 2822401-2834239 Medicago truncatula
Medtr6g009520 10.0kb downstream 10.0kb downstream 10000 false chr6: 2822401-2832400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122306441 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.01     High High
cufflinks 14.196     High  
cufflinks 12.982     High  
cufflinks 2.295       Low
cufflinks 19.637     High  
cufflinks 9.563        
cufflinks 4.111        
cufflinks 14.909     High  
cufflinks 3.13       Low

0 Strain