Gene : Medtr6g009400 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase Description:  rRNA methyltransferase YlbH-like protein, putative
Genomic Order:  361 Name:  ? Medtr6g009400
Secondary Identifier:  ? PAC:31103523
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g009400 0.5kb upstream 0.5kb upstream 4500 true chr6: 2765484-2769983 Medicago truncatula
Medtr6g009400 0.5kb upstream 0.5kb upstream 500 false chr6: 2769484-2769983 Medicago truncatula
Medtr6g009400 0.5kb downstream 0.5kb downstream 4500 true chr6: 2764984-2769483 Medicago truncatula
Medtr6g009400 0.5kb downstream 0.5kb downstream 500 false chr6: 2764984-2765483 Medicago truncatula
Medtr6g009400 1.0kb upstream 1.0kb upstream 5000 true chr6: 2765484-2770483 Medicago truncatula
Medtr6g009400 1.0kb upstream 1.0kb upstream 1000 false chr6: 2769484-2770483 Medicago truncatula
Medtr6g009400 1.0kb downstream 1.0kb downstream 5000 true chr6: 2764484-2769483 Medicago truncatula
Medtr6g009400 1.0kb downstream 1.0kb downstream 1000 false chr6: 2764484-2765483 Medicago truncatula
Medtr6g009400 2.0kb upstream 2.0kb upstream 6000 true chr6: 2765484-2771483 Medicago truncatula
Medtr6g009400 2.0kb upstream 2.0kb upstream 2000 false chr6: 2769484-2771483 Medicago truncatula
Medtr6g009400 2.0kb downstream 2.0kb downstream 6000 true chr6: 2763484-2769483 Medicago truncatula
Medtr6g009400 2.0kb downstream 2.0kb downstream 2000 false chr6: 2763484-2765483 Medicago truncatula
Medtr6g009400 5.0kb upstream 5.0kb upstream 9000 true chr6: 2765484-2774483 Medicago truncatula
Medtr6g009400 5.0kb upstream 5.0kb upstream 5000 false chr6: 2769484-2774483 Medicago truncatula
Medtr6g009400 5.0kb downstream 5.0kb downstream 9000 true chr6: 2760484-2769483 Medicago truncatula
Medtr6g009400 5.0kb downstream 5.0kb downstream 5000 false chr6: 2760484-2765483 Medicago truncatula
Medtr6g009400 10.0kb upstream 10.0kb upstream 14000 true chr6: 2765484-2779483 Medicago truncatula
Medtr6g009400 10.0kb upstream 10.0kb upstream 10000 false chr6: 2769484-2779483 Medicago truncatula
Medtr6g009400 10.0kb downstream 10.0kb downstream 14000 true chr6: 2755484-2769483 Medicago truncatula
Medtr6g009400 10.0kb downstream 10.0kb downstream 10000 false chr6: 2755484-2765483 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300830 5265 Fabidae View MSA
124067433 5270 Rosid View MSA
123738350 5271 Pentapetalae View MSA
122790005 5272 Eudicot View MSA
122044279 5273 Angiosperm View MSA
121347600 5274 Embryophyte View MSA
123423855 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.672        
cufflinks 2.326        
cufflinks 2.455        
cufflinks 0.117       Low
cufflinks 4.808       High
cufflinks 0.153       Low
cufflinks 0.281        
cufflinks 2.358        
cufflinks 0.916        

0 Strain