Gene : Medtr5g093300 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Description:  2-oxoacid dehydrogenase acyltransferase family protein
Genomic Order:  5374 Name:  ? Medtr5g093300
Secondary Identifier:  ? PAC:31088497
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5084 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g093300 0.5kb upstream 0.5kb upstream 7742 true chr5: 40729890-40737631 Medicago truncatula
Medtr5g093300 0.5kb upstream 0.5kb upstream 500 false chr5: 40729890-40730389 Medicago truncatula
Medtr5g093300 0.5kb downstream 0.5kb downstream 7742 true chr5: 40730390-40738131 Medicago truncatula
Medtr5g093300 0.5kb downstream 0.5kb downstream 500 false chr5: 40737632-40738131 Medicago truncatula
Medtr5g093300 1.0kb upstream 1.0kb upstream 8242 true chr5: 40729390-40737631 Medicago truncatula
Medtr5g093300 1.0kb upstream 1.0kb upstream 1000 false chr5: 40729390-40730389 Medicago truncatula
Medtr5g093300 1.0kb downstream 1.0kb downstream 8242 true chr5: 40730390-40738631 Medicago truncatula
Medtr5g093300 1.0kb downstream 1.0kb downstream 1000 false chr5: 40737632-40738631 Medicago truncatula
Medtr5g093300 2.0kb upstream 2.0kb upstream 9242 true chr5: 40728390-40737631 Medicago truncatula
Medtr5g093300 2.0kb upstream 2.0kb upstream 2000 false chr5: 40728390-40730389 Medicago truncatula
Medtr5g093300 2.0kb downstream 2.0kb downstream 9242 true chr5: 40730390-40739631 Medicago truncatula
Medtr5g093300 2.0kb downstream 2.0kb downstream 2000 false chr5: 40737632-40739631 Medicago truncatula
Medtr5g093300 5.0kb upstream 5.0kb upstream 12242 true chr5: 40725390-40737631 Medicago truncatula
Medtr5g093300 5.0kb upstream 5.0kb upstream 5000 false chr5: 40725390-40730389 Medicago truncatula
Medtr5g093300 5.0kb downstream 5.0kb downstream 12242 true chr5: 40730390-40742631 Medicago truncatula
Medtr5g093300 5.0kb downstream 5.0kb downstream 5000 false chr5: 40737632-40742631 Medicago truncatula
Medtr5g093300 10.0kb upstream 10.0kb upstream 17242 true chr5: 40720390-40737631 Medicago truncatula
Medtr5g093300 10.0kb upstream 10.0kb upstream 10000 false chr5: 40720390-40730389 Medicago truncatula
Medtr5g093300 10.0kb downstream 10.0kb downstream 17242 true chr5: 40730390-40747631 Medicago truncatula
Medtr5g093300 10.0kb downstream 10.0kb downstream 10000 false chr5: 40737632-40747631 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303630 5265 Fabidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.3        
cufflinks 4.609        
cufflinks 4.232        
cufflinks 3.916        
cufflinks 5.755       High
cufflinks 1.581       Low
cufflinks 3.275        
cufflinks 4.048        
cufflinks 4.941        

0 Strain