Gene : Medtr5g096460 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11528//PTHR11528:SF49 - HEAT SHOCK PROTEIN 90 Description:  heat shock protein 81-2
Genomic Order:  5618 Name:  ? Medtr5g096460
Secondary Identifier:  ? PAC:31090535
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g096460 0.5kb upstream 0.5kb upstream 4149 true chr5: 42174906-42179054 Medicago truncatula
Medtr5g096460 0.5kb upstream 0.5kb upstream 500 false chr5: 42178555-42179054 Medicago truncatula
Medtr5g096460 0.5kb downstream 0.5kb downstream 4149 true chr5: 42174406-42178554 Medicago truncatula
Medtr5g096460 0.5kb downstream 0.5kb downstream 500 false chr5: 42174406-42174905 Medicago truncatula
Medtr5g096460 1.0kb upstream 1.0kb upstream 4649 true chr5: 42174906-42179554 Medicago truncatula
Medtr5g096460 1.0kb upstream 1.0kb upstream 1000 false chr5: 42178555-42179554 Medicago truncatula
Medtr5g096460 1.0kb downstream 1.0kb downstream 4649 true chr5: 42173906-42178554 Medicago truncatula
Medtr5g096460 1.0kb downstream 1.0kb downstream 1000 false chr5: 42173906-42174905 Medicago truncatula
Medtr5g096460 2.0kb upstream 2.0kb upstream 5649 true chr5: 42174906-42180554 Medicago truncatula
Medtr5g096460 2.0kb upstream 2.0kb upstream 2000 false chr5: 42178555-42180554 Medicago truncatula
Medtr5g096460 2.0kb downstream 2.0kb downstream 5649 true chr5: 42172906-42178554 Medicago truncatula
Medtr5g096460 2.0kb downstream 2.0kb downstream 2000 false chr5: 42172906-42174905 Medicago truncatula
Medtr5g096460 5.0kb upstream 5.0kb upstream 8649 true chr5: 42174906-42183554 Medicago truncatula
Medtr5g096460 5.0kb upstream 5.0kb upstream 5000 false chr5: 42178555-42183554 Medicago truncatula
Medtr5g096460 5.0kb downstream 5.0kb downstream 8649 true chr5: 42169906-42178554 Medicago truncatula
Medtr5g096460 5.0kb downstream 5.0kb downstream 5000 false chr5: 42169906-42174905 Medicago truncatula
Medtr5g096460 10.0kb upstream 10.0kb upstream 13649 true chr5: 42174906-42188554 Medicago truncatula
Medtr5g096460 10.0kb upstream 10.0kb upstream 10000 false chr5: 42178555-42188554 Medicago truncatula
Medtr5g096460 10.0kb downstream 10.0kb downstream 13649 true chr5: 42164906-42178554 Medicago truncatula
Medtr5g096460 10.0kb downstream 10.0kb downstream 10000 false chr5: 42164906-42174905 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312265 5265 Fabidae View MSA
124072569 5270 Rosid View MSA
123746935 5271 Pentapetalae View MSA
122790601 5272 Eudicot View MSA
122044273 5273 Angiosperm View MSA
121351601 5274 Embryophyte View MSA
123424999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.184     High  
cufflinks 18.456     High  
cufflinks 7.754       Low
cufflinks 18.792     High  
cufflinks 13.373     High  
cufflinks 13.167     High  
cufflinks 21.759     High  
cufflinks 7.62       Low
cufflinks 26.111     High High

0 Strain