Gene : Medtr5g096290 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Description:  DUF1296 family protein
Genomic Order:  5607 Name:  ? Medtr5g096290
Secondary Identifier:  ? PAC:31086795
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g096290 0.5kb upstream 0.5kb upstream 8639 true chr5: 42098831-42107469 Medicago truncatula
Medtr5g096290 0.5kb upstream 0.5kb upstream 500 false chr5: 42098831-42099330 Medicago truncatula
Medtr5g096290 0.5kb downstream 0.5kb downstream 8639 true chr5: 42099331-42107969 Medicago truncatula
Medtr5g096290 0.5kb downstream 0.5kb downstream 500 false chr5: 42107470-42107969 Medicago truncatula
Medtr5g096290 1.0kb upstream 1.0kb upstream 9139 true chr5: 42098331-42107469 Medicago truncatula
Medtr5g096290 1.0kb upstream 1.0kb upstream 1000 false chr5: 42098331-42099330 Medicago truncatula
Medtr5g096290 1.0kb downstream 1.0kb downstream 9139 true chr5: 42099331-42108469 Medicago truncatula
Medtr5g096290 1.0kb downstream 1.0kb downstream 1000 false chr5: 42107470-42108469 Medicago truncatula
Medtr5g096290 2.0kb upstream 2.0kb upstream 10139 true chr5: 42097331-42107469 Medicago truncatula
Medtr5g096290 2.0kb upstream 2.0kb upstream 2000 false chr5: 42097331-42099330 Medicago truncatula
Medtr5g096290 2.0kb downstream 2.0kb downstream 10139 true chr5: 42099331-42109469 Medicago truncatula
Medtr5g096290 2.0kb downstream 2.0kb downstream 2000 false chr5: 42107470-42109469 Medicago truncatula
Medtr5g096290 5.0kb upstream 5.0kb upstream 13139 true chr5: 42094331-42107469 Medicago truncatula
Medtr5g096290 5.0kb upstream 5.0kb upstream 5000 false chr5: 42094331-42099330 Medicago truncatula
Medtr5g096290 5.0kb downstream 5.0kb downstream 13139 true chr5: 42099331-42112469 Medicago truncatula
Medtr5g096290 5.0kb downstream 5.0kb downstream 5000 false chr5: 42107470-42112469 Medicago truncatula
Medtr5g096290 10.0kb upstream 10.0kb upstream 18139 true chr5: 42089331-42107469 Medicago truncatula
Medtr5g096290 10.0kb upstream 10.0kb upstream 10000 false chr5: 42089331-42099330 Medicago truncatula
Medtr5g096290 10.0kb downstream 10.0kb downstream 18139 true chr5: 42099331-42117469 Medicago truncatula
Medtr5g096290 10.0kb downstream 10.0kb downstream 10000 false chr5: 42107470-42117469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122302951 5265 Fabidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.496        
cufflinks 3.1        
cufflinks 2.768        
cufflinks 2.944        
cufflinks 4.673       High
cufflinks 0.871       Low
cufflinks 2.749        
cufflinks 2.539        
cufflinks 3.168        

0 Strain