Gene : Medtr5g097260 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Description:  Nup133/Nup155-like nucleoporin
Genomic Order:  5683 Name:  ? Medtr5g097260
Secondary Identifier:  ? PAC:31091198
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g097260 0.5kb upstream 0.5kb upstream 9781 true chr5: 42581184-42590964 Medicago truncatula
Medtr5g097260 0.5kb upstream 0.5kb upstream 500 false chr5: 42581184-42581683 Medicago truncatula
Medtr5g097260 0.5kb downstream 0.5kb downstream 9781 true chr5: 42581684-42591464 Medicago truncatula
Medtr5g097260 0.5kb downstream 0.5kb downstream 500 false chr5: 42590965-42591464 Medicago truncatula
Medtr5g097260 1.0kb upstream 1.0kb upstream 10281 true chr5: 42580684-42590964 Medicago truncatula
Medtr5g097260 1.0kb upstream 1.0kb upstream 1000 false chr5: 42580684-42581683 Medicago truncatula
Medtr5g097260 1.0kb downstream 1.0kb downstream 10281 true chr5: 42581684-42591964 Medicago truncatula
Medtr5g097260 1.0kb downstream 1.0kb downstream 1000 false chr5: 42590965-42591964 Medicago truncatula
Medtr5g097260 2.0kb upstream 2.0kb upstream 11281 true chr5: 42579684-42590964 Medicago truncatula
Medtr5g097260 2.0kb upstream 2.0kb upstream 2000 false chr5: 42579684-42581683 Medicago truncatula
Medtr5g097260 2.0kb downstream 2.0kb downstream 11281 true chr5: 42581684-42592964 Medicago truncatula
Medtr5g097260 2.0kb downstream 2.0kb downstream 2000 false chr5: 42590965-42592964 Medicago truncatula
Medtr5g097260 5.0kb upstream 5.0kb upstream 14281 true chr5: 42576684-42590964 Medicago truncatula
Medtr5g097260 5.0kb upstream 5.0kb upstream 5000 false chr5: 42576684-42581683 Medicago truncatula
Medtr5g097260 5.0kb downstream 5.0kb downstream 14281 true chr5: 42581684-42595964 Medicago truncatula
Medtr5g097260 5.0kb downstream 5.0kb downstream 5000 false chr5: 42590965-42595964 Medicago truncatula
Medtr5g097260 10.0kb upstream 10.0kb upstream 19281 true chr5: 42571684-42590964 Medicago truncatula
Medtr5g097260 10.0kb upstream 10.0kb upstream 10000 false chr5: 42571684-42581683 Medicago truncatula
Medtr5g097260 10.0kb downstream 10.0kb downstream 19281 true chr5: 42581684-42600964 Medicago truncatula
Medtr5g097260 10.0kb downstream 10.0kb downstream 10000 false chr5: 42590965-42600964 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307981 5265 Fabidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.516        
cufflinks 0.792        
cufflinks 0.864        
cufflinks 0.111       Low
cufflinks 1.161        
cufflinks 0.061     Low Low
cufflinks 0.47        
cufflinks 0.829        
cufflinks 0.622        

0 Strain