Gene : Medtr5g095510 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3068 - mRNA splicing factor Description:  Pre-mRNA-splicing factor ISY1
Genomic Order:  5545 Name:  ? Medtr5g095510
Secondary Identifier:  ? PAC:31087214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g095510 0.5kb upstream 0.5kb upstream 4606 true chr5: 41743074-41747679 Medicago truncatula
Medtr5g095510 0.5kb upstream 0.5kb upstream 500 false chr5: 41743074-41743573 Medicago truncatula
Medtr5g095510 0.5kb downstream 0.5kb downstream 4606 true chr5: 41743574-41748179 Medicago truncatula
Medtr5g095510 0.5kb downstream 0.5kb downstream 500 false chr5: 41747680-41748179 Medicago truncatula
Medtr5g095510 1.0kb upstream 1.0kb upstream 5106 true chr5: 41742574-41747679 Medicago truncatula
Medtr5g095510 1.0kb upstream 1.0kb upstream 1000 false chr5: 41742574-41743573 Medicago truncatula
Medtr5g095510 1.0kb downstream 1.0kb downstream 5106 true chr5: 41743574-41748679 Medicago truncatula
Medtr5g095510 1.0kb downstream 1.0kb downstream 1000 false chr5: 41747680-41748679 Medicago truncatula
Medtr5g095510 2.0kb upstream 2.0kb upstream 6106 true chr5: 41741574-41747679 Medicago truncatula
Medtr5g095510 2.0kb upstream 2.0kb upstream 2000 false chr5: 41741574-41743573 Medicago truncatula
Medtr5g095510 2.0kb downstream 2.0kb downstream 6106 true chr5: 41743574-41749679 Medicago truncatula
Medtr5g095510 2.0kb downstream 2.0kb downstream 2000 false chr5: 41747680-41749679 Medicago truncatula
Medtr5g095510 5.0kb upstream 5.0kb upstream 9106 true chr5: 41738574-41747679 Medicago truncatula
Medtr5g095510 5.0kb upstream 5.0kb upstream 5000 false chr5: 41738574-41743573 Medicago truncatula
Medtr5g095510 5.0kb downstream 5.0kb downstream 9106 true chr5: 41743574-41752679 Medicago truncatula
Medtr5g095510 5.0kb downstream 5.0kb downstream 5000 false chr5: 41747680-41752679 Medicago truncatula
Medtr5g095510 10.0kb upstream 10.0kb upstream 14106 true chr5: 41733574-41747679 Medicago truncatula
Medtr5g095510 10.0kb upstream 10.0kb upstream 10000 false chr5: 41733574-41743573 Medicago truncatula
Medtr5g095510 10.0kb downstream 10.0kb downstream 14106 true chr5: 41743574-41757679 Medicago truncatula
Medtr5g095510 10.0kb downstream 10.0kb downstream 10000 false chr5: 41747680-41757679 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303905 5265 Fabidae View MSA
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.206        
cufflinks 3.398        
cufflinks 2.98        
cufflinks 2.604        
cufflinks 4.558       High
cufflinks 1.246       Low
cufflinks 3.371        
cufflinks 2.816        
cufflinks 3.186        

0 Strain