Gene : Medtr5g095090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10848//PTHR10848:SF3 - MEIOTIC RECOMBINATION PROTEIN SPO11 Description:  meiotic recombination SPO11-like protein
Genomic Order:  5514 Name:  ? Medtr5g095090
Secondary Identifier:  ? PAC:31090726
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g095090 0.5kb upstream 0.5kb upstream 4996 true chr5: 41557000-41561995 Medicago truncatula
Medtr5g095090 0.5kb upstream 0.5kb upstream 500 false chr5: 41557000-41557499 Medicago truncatula
Medtr5g095090 0.5kb downstream 0.5kb downstream 4996 true chr5: 41557500-41562495 Medicago truncatula
Medtr5g095090 0.5kb downstream 0.5kb downstream 500 false chr5: 41561996-41562495 Medicago truncatula
Medtr5g095090 1.0kb upstream 1.0kb upstream 5496 true chr5: 41556500-41561995 Medicago truncatula
Medtr5g095090 1.0kb upstream 1.0kb upstream 1000 false chr5: 41556500-41557499 Medicago truncatula
Medtr5g095090 1.0kb downstream 1.0kb downstream 5496 true chr5: 41557500-41562995 Medicago truncatula
Medtr5g095090 1.0kb downstream 1.0kb downstream 1000 false chr5: 41561996-41562995 Medicago truncatula
Medtr5g095090 2.0kb upstream 2.0kb upstream 6496 true chr5: 41555500-41561995 Medicago truncatula
Medtr5g095090 2.0kb upstream 2.0kb upstream 2000 false chr5: 41555500-41557499 Medicago truncatula
Medtr5g095090 2.0kb downstream 2.0kb downstream 6496 true chr5: 41557500-41563995 Medicago truncatula
Medtr5g095090 2.0kb downstream 2.0kb downstream 2000 false chr5: 41561996-41563995 Medicago truncatula
Medtr5g095090 5.0kb upstream 5.0kb upstream 9496 true chr5: 41552500-41561995 Medicago truncatula
Medtr5g095090 5.0kb upstream 5.0kb upstream 5000 false chr5: 41552500-41557499 Medicago truncatula
Medtr5g095090 5.0kb downstream 5.0kb downstream 9496 true chr5: 41557500-41566995 Medicago truncatula
Medtr5g095090 5.0kb downstream 5.0kb downstream 5000 false chr5: 41561996-41566995 Medicago truncatula
Medtr5g095090 10.0kb upstream 10.0kb upstream 14496 true chr5: 41547500-41561995 Medicago truncatula
Medtr5g095090 10.0kb upstream 10.0kb upstream 10000 false chr5: 41547500-41557499 Medicago truncatula
Medtr5g095090 10.0kb downstream 10.0kb downstream 14496 true chr5: 41557500-41571995 Medicago truncatula
Medtr5g095090 10.0kb downstream 10.0kb downstream 10000 false chr5: 41561996-41571995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306972 5265 Fabidae View MSA
124062052 5270 Rosid View MSA
123749543 5271 Pentapetalae View MSA
122787216 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.041     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.038     Low  

0 Strain