Gene : Medtr5g095040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10848//PTHR10848:SF3 - MEIOTIC RECOMBINATION PROTEIN SPO11 Description:  meiotic recombination SPO11-like protein
Genomic Order:  5511 Name:  ? Medtr5g095040
Secondary Identifier:  ? PAC:31087338
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g095040 0.5kb upstream 0.5kb upstream 3866 true chr5: 41541294-41545159 Medicago truncatula
Medtr5g095040 0.5kb upstream 0.5kb upstream 500 false chr5: 41541294-41541793 Medicago truncatula
Medtr5g095040 0.5kb downstream 0.5kb downstream 3866 true chr5: 41541794-41545659 Medicago truncatula
Medtr5g095040 0.5kb downstream 0.5kb downstream 500 false chr5: 41545160-41545659 Medicago truncatula
Medtr5g095040 1.0kb upstream 1.0kb upstream 4366 true chr5: 41540794-41545159 Medicago truncatula
Medtr5g095040 1.0kb upstream 1.0kb upstream 1000 false chr5: 41540794-41541793 Medicago truncatula
Medtr5g095040 1.0kb downstream 1.0kb downstream 4366 true chr5: 41541794-41546159 Medicago truncatula
Medtr5g095040 1.0kb downstream 1.0kb downstream 1000 false chr5: 41545160-41546159 Medicago truncatula
Medtr5g095040 2.0kb upstream 2.0kb upstream 5366 true chr5: 41539794-41545159 Medicago truncatula
Medtr5g095040 2.0kb upstream 2.0kb upstream 2000 false chr5: 41539794-41541793 Medicago truncatula
Medtr5g095040 2.0kb downstream 2.0kb downstream 5366 true chr5: 41541794-41547159 Medicago truncatula
Medtr5g095040 2.0kb downstream 2.0kb downstream 2000 false chr5: 41545160-41547159 Medicago truncatula
Medtr5g095040 5.0kb upstream 5.0kb upstream 8366 true chr5: 41536794-41545159 Medicago truncatula
Medtr5g095040 5.0kb upstream 5.0kb upstream 5000 false chr5: 41536794-41541793 Medicago truncatula
Medtr5g095040 5.0kb downstream 5.0kb downstream 8366 true chr5: 41541794-41550159 Medicago truncatula
Medtr5g095040 5.0kb downstream 5.0kb downstream 5000 false chr5: 41545160-41550159 Medicago truncatula
Medtr5g095040 10.0kb upstream 10.0kb upstream 13366 true chr5: 41531794-41545159 Medicago truncatula
Medtr5g095040 10.0kb upstream 10.0kb upstream 10000 false chr5: 41531794-41541793 Medicago truncatula
Medtr5g095040 10.0kb downstream 10.0kb downstream 13366 true chr5: 41541794-41555159 Medicago truncatula
Medtr5g095040 10.0kb downstream 10.0kb downstream 10000 false chr5: 41545160-41555159 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306972 5265 Fabidae View MSA
124062052 5270 Rosid View MSA
123749543 5271 Pentapetalae View MSA
122787216 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low High

0 Strain