Gene : Medtr5g095130 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  5517 Name:  ? Medtr5g095130
Secondary Identifier:  ? PAC:31089827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g095130 0.5kb upstream 0.5kb upstream 3935 true chr5: 41574902-41578836 Medicago truncatula
Medtr5g095130 0.5kb upstream 0.5kb upstream 500 false chr5: 41578337-41578836 Medicago truncatula
Medtr5g095130 0.5kb downstream 0.5kb downstream 3935 true chr5: 41574402-41578336 Medicago truncatula
Medtr5g095130 0.5kb downstream 0.5kb downstream 500 false chr5: 41574402-41574901 Medicago truncatula
Medtr5g095130 1.0kb upstream 1.0kb upstream 4435 true chr5: 41574902-41579336 Medicago truncatula
Medtr5g095130 1.0kb upstream 1.0kb upstream 1000 false chr5: 41578337-41579336 Medicago truncatula
Medtr5g095130 1.0kb downstream 1.0kb downstream 4435 true chr5: 41573902-41578336 Medicago truncatula
Medtr5g095130 1.0kb downstream 1.0kb downstream 1000 false chr5: 41573902-41574901 Medicago truncatula
Medtr5g095130 2.0kb upstream 2.0kb upstream 5435 true chr5: 41574902-41580336 Medicago truncatula
Medtr5g095130 2.0kb upstream 2.0kb upstream 2000 false chr5: 41578337-41580336 Medicago truncatula
Medtr5g095130 2.0kb downstream 2.0kb downstream 5435 true chr5: 41572902-41578336 Medicago truncatula
Medtr5g095130 2.0kb downstream 2.0kb downstream 2000 false chr5: 41572902-41574901 Medicago truncatula
Medtr5g095130 5.0kb upstream 5.0kb upstream 8435 true chr5: 41574902-41583336 Medicago truncatula
Medtr5g095130 5.0kb upstream 5.0kb upstream 5000 false chr5: 41578337-41583336 Medicago truncatula
Medtr5g095130 5.0kb downstream 5.0kb downstream 8435 true chr5: 41569902-41578336 Medicago truncatula
Medtr5g095130 5.0kb downstream 5.0kb downstream 5000 false chr5: 41569902-41574901 Medicago truncatula
Medtr5g095130 10.0kb upstream 10.0kb upstream 13435 true chr5: 41574902-41588336 Medicago truncatula
Medtr5g095130 10.0kb upstream 10.0kb upstream 10000 false chr5: 41578337-41588336 Medicago truncatula
Medtr5g095130 10.0kb downstream 10.0kb downstream 13435 true chr5: 41564902-41578336 Medicago truncatula
Medtr5g095130 10.0kb downstream 10.0kb downstream 10000 false chr5: 41564902-41574901 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302112 5265 Fabidae View MSA
124068825 5270 Rosid View MSA
123736468 5271 Pentapetalae View MSA
122787025 5272 Eudicot View MSA
122042185 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.682        
cufflinks 0.304        
cufflinks 0.508        
cufflinks 0.096       Low
cufflinks 1.058       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.772        
cufflinks 0.5        
cufflinks 0.588        

0 Strain