Gene : Medtr5g097480 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31636:SF38 - SCARECROW-LIKE PROTEIN 21-RELATED Description:  GRAS family transcription factor
Genomic Order:  5698 Name:  ? Medtr5g097480
Secondary Identifier:  ? PAC:31090813
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g097480 0.5kb upstream 0.5kb upstream 4096 true chr5: 42698970-42703065 Medicago truncatula
Medtr5g097480 0.5kb upstream 0.5kb upstream 500 false chr5: 42698970-42699469 Medicago truncatula
Medtr5g097480 0.5kb downstream 0.5kb downstream 4096 true chr5: 42699470-42703565 Medicago truncatula
Medtr5g097480 0.5kb downstream 0.5kb downstream 500 false chr5: 42703066-42703565 Medicago truncatula
Medtr5g097480 1.0kb upstream 1.0kb upstream 4596 true chr5: 42698470-42703065 Medicago truncatula
Medtr5g097480 1.0kb upstream 1.0kb upstream 1000 false chr5: 42698470-42699469 Medicago truncatula
Medtr5g097480 1.0kb downstream 1.0kb downstream 4596 true chr5: 42699470-42704065 Medicago truncatula
Medtr5g097480 1.0kb downstream 1.0kb downstream 1000 false chr5: 42703066-42704065 Medicago truncatula
Medtr5g097480 2.0kb upstream 2.0kb upstream 5596 true chr5: 42697470-42703065 Medicago truncatula
Medtr5g097480 2.0kb upstream 2.0kb upstream 2000 false chr5: 42697470-42699469 Medicago truncatula
Medtr5g097480 2.0kb downstream 2.0kb downstream 5596 true chr5: 42699470-42705065 Medicago truncatula
Medtr5g097480 2.0kb downstream 2.0kb downstream 2000 false chr5: 42703066-42705065 Medicago truncatula
Medtr5g097480 5.0kb upstream 5.0kb upstream 8596 true chr5: 42694470-42703065 Medicago truncatula
Medtr5g097480 5.0kb upstream 5.0kb upstream 5000 false chr5: 42694470-42699469 Medicago truncatula
Medtr5g097480 5.0kb downstream 5.0kb downstream 8596 true chr5: 42699470-42708065 Medicago truncatula
Medtr5g097480 5.0kb downstream 5.0kb downstream 5000 false chr5: 42703066-42708065 Medicago truncatula
Medtr5g097480 10.0kb upstream 10.0kb upstream 13596 true chr5: 42689470-42703065 Medicago truncatula
Medtr5g097480 10.0kb upstream 10.0kb upstream 10000 false chr5: 42689470-42699469 Medicago truncatula
Medtr5g097480 10.0kb downstream 10.0kb downstream 13596 true chr5: 42699470-42713065 Medicago truncatula
Medtr5g097480 10.0kb downstream 10.0kb downstream 10000 false chr5: 42703066-42713065 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305860 5265 Fabidae View MSA
124064527 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.381       Low
cufflinks 5.389        
cufflinks 6.906        
cufflinks 23.856     High High
cufflinks 8.537        
cufflinks 17.252     High  
cufflinks 8.319        
cufflinks 5.001        
cufflinks 13.441     High  

0 Strain