Gene : Medtr5g098310 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Description:  peroxisomal acetoacetyl-coenzyme A thiolase
Genomic Order:  5751 Name:  ? Medtr5g098310
Secondary Identifier:  ? PAC:31088508
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ILEUDEG-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5910 Medicago truncatula pathologic  
Mtruncatula PWY-922 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g098310 0.5kb upstream 0.5kb upstream 5850 true chr5: 43046555-43052404 Medicago truncatula
Medtr5g098310 0.5kb upstream 0.5kb upstream 500 false chr5: 43051905-43052404 Medicago truncatula
Medtr5g098310 0.5kb downstream 0.5kb downstream 5850 true chr5: 43046055-43051904 Medicago truncatula
Medtr5g098310 0.5kb downstream 0.5kb downstream 500 false chr5: 43046055-43046554 Medicago truncatula
Medtr5g098310 1.0kb upstream 1.0kb upstream 6350 true chr5: 43046555-43052904 Medicago truncatula
Medtr5g098310 1.0kb upstream 1.0kb upstream 1000 false chr5: 43051905-43052904 Medicago truncatula
Medtr5g098310 1.0kb downstream 1.0kb downstream 6350 true chr5: 43045555-43051904 Medicago truncatula
Medtr5g098310 1.0kb downstream 1.0kb downstream 1000 false chr5: 43045555-43046554 Medicago truncatula
Medtr5g098310 2.0kb upstream 2.0kb upstream 7350 true chr5: 43046555-43053904 Medicago truncatula
Medtr5g098310 2.0kb upstream 2.0kb upstream 2000 false chr5: 43051905-43053904 Medicago truncatula
Medtr5g098310 2.0kb downstream 2.0kb downstream 7350 true chr5: 43044555-43051904 Medicago truncatula
Medtr5g098310 2.0kb downstream 2.0kb downstream 2000 false chr5: 43044555-43046554 Medicago truncatula
Medtr5g098310 5.0kb upstream 5.0kb upstream 10350 true chr5: 43046555-43056904 Medicago truncatula
Medtr5g098310 5.0kb upstream 5.0kb upstream 5000 false chr5: 43051905-43056904 Medicago truncatula
Medtr5g098310 5.0kb downstream 5.0kb downstream 10350 true chr5: 43041555-43051904 Medicago truncatula
Medtr5g098310 5.0kb downstream 5.0kb downstream 5000 false chr5: 43041555-43046554 Medicago truncatula
Medtr5g098310 10.0kb upstream 10.0kb upstream 15350 true chr5: 43046555-43061904 Medicago truncatula
Medtr5g098310 10.0kb upstream 10.0kb upstream 10000 false chr5: 43051905-43061904 Medicago truncatula
Medtr5g098310 10.0kb downstream 10.0kb downstream 15350 true chr5: 43036555-43051904 Medicago truncatula
Medtr5g098310 10.0kb downstream 10.0kb downstream 10000 false chr5: 43036555-43046554 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301203 5265 Fabidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.567        
cufflinks 1.215        
cufflinks 0.654       Low
cufflinks 3.669        
cufflinks 1.82        
cufflinks 3.472        
cufflinks 2.28        
cufflinks 0.695       Low
cufflinks 5.602       High

0 Strain