Gene : Medtr5g098060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32077:SF3 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  5734 Name:  ? Medtr5g098060
Secondary Identifier:  ? PAC:31089029
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g098060 0.5kb upstream 0.5kb upstream 2616 true chr5: 42932781-42935396 Medicago truncatula
Medtr5g098060 0.5kb upstream 0.5kb upstream 500 false chr5: 42932781-42933280 Medicago truncatula
Medtr5g098060 0.5kb downstream 0.5kb downstream 2616 true chr5: 42933281-42935896 Medicago truncatula
Medtr5g098060 0.5kb downstream 0.5kb downstream 500 false chr5: 42935397-42935896 Medicago truncatula
Medtr5g098060 1.0kb upstream 1.0kb upstream 3116 true chr5: 42932281-42935396 Medicago truncatula
Medtr5g098060 1.0kb upstream 1.0kb upstream 1000 false chr5: 42932281-42933280 Medicago truncatula
Medtr5g098060 1.0kb downstream 1.0kb downstream 3116 true chr5: 42933281-42936396 Medicago truncatula
Medtr5g098060 1.0kb downstream 1.0kb downstream 1000 false chr5: 42935397-42936396 Medicago truncatula
Medtr5g098060 2.0kb upstream 2.0kb upstream 4116 true chr5: 42931281-42935396 Medicago truncatula
Medtr5g098060 2.0kb upstream 2.0kb upstream 2000 false chr5: 42931281-42933280 Medicago truncatula
Medtr5g098060 2.0kb downstream 2.0kb downstream 4116 true chr5: 42933281-42937396 Medicago truncatula
Medtr5g098060 2.0kb downstream 2.0kb downstream 2000 false chr5: 42935397-42937396 Medicago truncatula
Medtr5g098060 5.0kb upstream 5.0kb upstream 7116 true chr5: 42928281-42935396 Medicago truncatula
Medtr5g098060 5.0kb upstream 5.0kb upstream 5000 false chr5: 42928281-42933280 Medicago truncatula
Medtr5g098060 5.0kb downstream 5.0kb downstream 7116 true chr5: 42933281-42940396 Medicago truncatula
Medtr5g098060 5.0kb downstream 5.0kb downstream 5000 false chr5: 42935397-42940396 Medicago truncatula
Medtr5g098060 10.0kb upstream 10.0kb upstream 12116 true chr5: 42923281-42935396 Medicago truncatula
Medtr5g098060 10.0kb upstream 10.0kb upstream 10000 false chr5: 42923281-42933280 Medicago truncatula
Medtr5g098060 10.0kb downstream 10.0kb downstream 12116 true chr5: 42933281-42945396 Medicago truncatula
Medtr5g098060 10.0kb downstream 10.0kb downstream 10000 false chr5: 42935397-42945396 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299041 5265 Fabidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.728     High  
cufflinks 19.577     High  
cufflinks 10.202     High  
cufflinks 32.093     High  
cufflinks 21.432     High  
cufflinks 9.401       Low
cufflinks 23.324     High  
cufflinks 13.294     High  
cufflinks 62.803     High High

0 Strain