Gene : Medtr5g098980 M. truncatula Mt4.0v1
Defline:  (1 of 17) PF04783 - Protein of unknown function (DUF630) (DUF630) Description:  BZIP transcription factor
Genomic Order:  5803 Name:  ? Medtr5g098980
Secondary Identifier:  ? PAC:31085896
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g098980 0.5kb upstream 0.5kb upstream 4416 true chr5: 43341724-43346139 Medicago truncatula
Medtr5g098980 0.5kb upstream 0.5kb upstream 500 false chr5: 43345640-43346139 Medicago truncatula
Medtr5g098980 0.5kb downstream 0.5kb downstream 4416 true chr5: 43341224-43345639 Medicago truncatula
Medtr5g098980 0.5kb downstream 0.5kb downstream 500 false chr5: 43341224-43341723 Medicago truncatula
Medtr5g098980 1.0kb upstream 1.0kb upstream 4916 true chr5: 43341724-43346639 Medicago truncatula
Medtr5g098980 1.0kb upstream 1.0kb upstream 1000 false chr5: 43345640-43346639 Medicago truncatula
Medtr5g098980 1.0kb downstream 1.0kb downstream 4916 true chr5: 43340724-43345639 Medicago truncatula
Medtr5g098980 1.0kb downstream 1.0kb downstream 1000 false chr5: 43340724-43341723 Medicago truncatula
Medtr5g098980 2.0kb upstream 2.0kb upstream 5916 true chr5: 43341724-43347639 Medicago truncatula
Medtr5g098980 2.0kb upstream 2.0kb upstream 2000 false chr5: 43345640-43347639 Medicago truncatula
Medtr5g098980 2.0kb downstream 2.0kb downstream 5916 true chr5: 43339724-43345639 Medicago truncatula
Medtr5g098980 2.0kb downstream 2.0kb downstream 2000 false chr5: 43339724-43341723 Medicago truncatula
Medtr5g098980 5.0kb upstream 5.0kb upstream 8916 true chr5: 43341724-43350639 Medicago truncatula
Medtr5g098980 5.0kb upstream 5.0kb upstream 5000 false chr5: 43345640-43350639 Medicago truncatula
Medtr5g098980 5.0kb downstream 5.0kb downstream 8916 true chr5: 43336724-43345639 Medicago truncatula
Medtr5g098980 5.0kb downstream 5.0kb downstream 5000 false chr5: 43336724-43341723 Medicago truncatula
Medtr5g098980 10.0kb upstream 10.0kb upstream 13916 true chr5: 43341724-43355639 Medicago truncatula
Medtr5g098980 10.0kb upstream 10.0kb upstream 10000 false chr5: 43345640-43355639 Medicago truncatula
Medtr5g098980 10.0kb downstream 10.0kb downstream 13916 true chr5: 43331724-43345639 Medicago truncatula
Medtr5g098980 10.0kb downstream 10.0kb downstream 10000 false chr5: 43331724-43341723 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304879 5265 Fabidae View MSA
124061236 5270 Rosid View MSA
123745447 5271 Pentapetalae View MSA
122790852 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.092        
cufflinks 6.231        
cufflinks 6.565       High
cufflinks 1.929       Low
cufflinks 6.64       High
cufflinks 1.694       Low
cufflinks 3.681        
cufflinks 5.151        
cufflinks 2.274        

0 Strain