Gene : Medtr5g099040 M. truncatula Mt4.0v1
Defline:  (1 of 48) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Description:  C2H2-type zinc finger protein
Genomic Order:  5809 Name:  ? Medtr5g099040
Secondary Identifier:  ? PAC:31091041
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g099040 0.5kb upstream 0.5kb upstream 1340 true chr5: 43382673-43384012 Medicago truncatula
Medtr5g099040 0.5kb upstream 0.5kb upstream 500 false chr5: 43382673-43383172 Medicago truncatula
Medtr5g099040 0.5kb downstream 0.5kb downstream 1340 true chr5: 43383173-43384512 Medicago truncatula
Medtr5g099040 0.5kb downstream 0.5kb downstream 500 false chr5: 43384013-43384512 Medicago truncatula
Medtr5g099040 1.0kb upstream 1.0kb upstream 1840 true chr5: 43382173-43384012 Medicago truncatula
Medtr5g099040 1.0kb upstream 1.0kb upstream 1000 false chr5: 43382173-43383172 Medicago truncatula
Medtr5g099040 1.0kb downstream 1.0kb downstream 1840 true chr5: 43383173-43385012 Medicago truncatula
Medtr5g099040 1.0kb downstream 1.0kb downstream 1000 false chr5: 43384013-43385012 Medicago truncatula
Medtr5g099040 2.0kb upstream 2.0kb upstream 2840 true chr5: 43381173-43384012 Medicago truncatula
Medtr5g099040 2.0kb upstream 2.0kb upstream 2000 false chr5: 43381173-43383172 Medicago truncatula
Medtr5g099040 2.0kb downstream 2.0kb downstream 2840 true chr5: 43383173-43386012 Medicago truncatula
Medtr5g099040 2.0kb downstream 2.0kb downstream 2000 false chr5: 43384013-43386012 Medicago truncatula
Medtr5g099040 5.0kb upstream 5.0kb upstream 5840 true chr5: 43378173-43384012 Medicago truncatula
Medtr5g099040 5.0kb upstream 5.0kb upstream 5000 false chr5: 43378173-43383172 Medicago truncatula
Medtr5g099040 5.0kb downstream 5.0kb downstream 5840 true chr5: 43383173-43389012 Medicago truncatula
Medtr5g099040 5.0kb downstream 5.0kb downstream 5000 false chr5: 43384013-43389012 Medicago truncatula
Medtr5g099040 10.0kb upstream 10.0kb upstream 10840 true chr5: 43373173-43384012 Medicago truncatula
Medtr5g099040 10.0kb upstream 10.0kb upstream 10000 false chr5: 43373173-43383172 Medicago truncatula
Medtr5g099040 10.0kb downstream 10.0kb downstream 10840 true chr5: 43383173-43394012 Medicago truncatula
Medtr5g099040 10.0kb downstream 10.0kb downstream 10000 false chr5: 43384013-43394012 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313707 5265 Fabidae View MSA
124071192 5270 Rosid View MSA
123746737 5271 Pentapetalae View MSA
122795761 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain