Gene : Medtr5g098850 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13779:SF7 - ATPASE WRNIP1 Description:  AAA family ATPase
Genomic Order:  5794 Name:  ? Medtr5g098850
Secondary Identifier:  ? PAC:31091240
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g098850 0.5kb upstream 0.5kb upstream 2646 true chr5: 43283972-43286617 Medicago truncatula
Medtr5g098850 0.5kb upstream 0.5kb upstream 500 false chr5: 43286118-43286617 Medicago truncatula
Medtr5g098850 0.5kb downstream 0.5kb downstream 2646 true chr5: 43283472-43286117 Medicago truncatula
Medtr5g098850 0.5kb downstream 0.5kb downstream 500 false chr5: 43283472-43283971 Medicago truncatula
Medtr5g098850 1.0kb upstream 1.0kb upstream 3146 true chr5: 43283972-43287117 Medicago truncatula
Medtr5g098850 1.0kb upstream 1.0kb upstream 1000 false chr5: 43286118-43287117 Medicago truncatula
Medtr5g098850 1.0kb downstream 1.0kb downstream 3146 true chr5: 43282972-43286117 Medicago truncatula
Medtr5g098850 1.0kb downstream 1.0kb downstream 1000 false chr5: 43282972-43283971 Medicago truncatula
Medtr5g098850 2.0kb upstream 2.0kb upstream 4146 true chr5: 43283972-43288117 Medicago truncatula
Medtr5g098850 2.0kb upstream 2.0kb upstream 2000 false chr5: 43286118-43288117 Medicago truncatula
Medtr5g098850 2.0kb downstream 2.0kb downstream 4146 true chr5: 43281972-43286117 Medicago truncatula
Medtr5g098850 2.0kb downstream 2.0kb downstream 2000 false chr5: 43281972-43283971 Medicago truncatula
Medtr5g098850 5.0kb upstream 5.0kb upstream 7146 true chr5: 43283972-43291117 Medicago truncatula
Medtr5g098850 5.0kb upstream 5.0kb upstream 5000 false chr5: 43286118-43291117 Medicago truncatula
Medtr5g098850 5.0kb downstream 5.0kb downstream 7146 true chr5: 43278972-43286117 Medicago truncatula
Medtr5g098850 5.0kb downstream 5.0kb downstream 5000 false chr5: 43278972-43283971 Medicago truncatula
Medtr5g098850 10.0kb upstream 10.0kb upstream 12146 true chr5: 43283972-43296117 Medicago truncatula
Medtr5g098850 10.0kb upstream 10.0kb upstream 10000 false chr5: 43286118-43296117 Medicago truncatula
Medtr5g098850 10.0kb downstream 10.0kb downstream 12146 true chr5: 43273972-43286117 Medicago truncatula
Medtr5g098850 10.0kb downstream 10.0kb downstream 10000 false chr5: 43273972-43283971 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312572 5265 Fabidae View MSA
124062737 5270 Rosid View MSA
123741179 5271 Pentapetalae View MSA
122789236 5272 Eudicot View MSA
122046798 5273 Angiosperm View MSA
121350619 5274 Embryophyte View MSA
123381819 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.821       High
cufflinks 4.183        
cufflinks 4.999        
cufflinks 4.451        
cufflinks 5.943        
cufflinks 2.114       Low
cufflinks 3.635        
cufflinks 4.354        
cufflinks 3.433        

0 Strain