Gene : Medtr6g082260 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11538//PTHR11538:SF42 - PHENYLALANYL-TRNA SYNTHETASE Description:  DUF2431 domain protein
Genomic Order:  3318 Name:  ? Medtr6g082260
Secondary Identifier:  ? PAC:31105470
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g082260 0.5kb upstream 0.5kb upstream 1968 true chr6: 30707666-30709633 Medicago truncatula
Medtr6g082260 0.5kb upstream 0.5kb upstream 500 false chr6: 30709134-30709633 Medicago truncatula
Medtr6g082260 0.5kb downstream 0.5kb downstream 1968 true chr6: 30707166-30709133 Medicago truncatula
Medtr6g082260 0.5kb downstream 0.5kb downstream 500 false chr6: 30707166-30707665 Medicago truncatula
Medtr6g082260 1.0kb upstream 1.0kb upstream 2468 true chr6: 30707666-30710133 Medicago truncatula
Medtr6g082260 1.0kb upstream 1.0kb upstream 1000 false chr6: 30709134-30710133 Medicago truncatula
Medtr6g082260 1.0kb downstream 1.0kb downstream 2468 true chr6: 30706666-30709133 Medicago truncatula
Medtr6g082260 1.0kb downstream 1.0kb downstream 1000 false chr6: 30706666-30707665 Medicago truncatula
Medtr6g082260 2.0kb upstream 2.0kb upstream 3468 true chr6: 30707666-30711133 Medicago truncatula
Medtr6g082260 2.0kb upstream 2.0kb upstream 2000 false chr6: 30709134-30711133 Medicago truncatula
Medtr6g082260 2.0kb downstream 2.0kb downstream 3468 true chr6: 30705666-30709133 Medicago truncatula
Medtr6g082260 2.0kb downstream 2.0kb downstream 2000 false chr6: 30705666-30707665 Medicago truncatula
Medtr6g082260 5.0kb upstream 5.0kb upstream 6468 true chr6: 30707666-30714133 Medicago truncatula
Medtr6g082260 5.0kb upstream 5.0kb upstream 5000 false chr6: 30709134-30714133 Medicago truncatula
Medtr6g082260 5.0kb downstream 5.0kb downstream 6468 true chr6: 30702666-30709133 Medicago truncatula
Medtr6g082260 5.0kb downstream 5.0kb downstream 5000 false chr6: 30702666-30707665 Medicago truncatula
Medtr6g082260 10.0kb upstream 10.0kb upstream 11468 true chr6: 30707666-30719133 Medicago truncatula
Medtr6g082260 10.0kb upstream 10.0kb upstream 10000 false chr6: 30709134-30719133 Medicago truncatula
Medtr6g082260 10.0kb downstream 10.0kb downstream 11468 true chr6: 30697666-30709133 Medicago truncatula
Medtr6g082260 10.0kb downstream 10.0kb downstream 10000 false chr6: 30697666-30707665 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
122310840 5265 Fabidae View MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain