Gene : Medtr6g084450 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Description:  proteasome subunit beta protein
Genomic Order:  3434 Name:  ? Medtr6g084450
Secondary Identifier:  ? PAC:31105455
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g084450 0.5kb upstream 0.5kb upstream 7073 true chr6: 31619061-31626133 Medicago truncatula
Medtr6g084450 0.5kb upstream 0.5kb upstream 500 false chr6: 31625634-31626133 Medicago truncatula
Medtr6g084450 0.5kb downstream 0.5kb downstream 7073 true chr6: 31618561-31625633 Medicago truncatula
Medtr6g084450 0.5kb downstream 0.5kb downstream 500 false chr6: 31618561-31619060 Medicago truncatula
Medtr6g084450 1.0kb upstream 1.0kb upstream 7573 true chr6: 31619061-31626633 Medicago truncatula
Medtr6g084450 1.0kb upstream 1.0kb upstream 1000 false chr6: 31625634-31626633 Medicago truncatula
Medtr6g084450 1.0kb downstream 1.0kb downstream 7573 true chr6: 31618061-31625633 Medicago truncatula
Medtr6g084450 1.0kb downstream 1.0kb downstream 1000 false chr6: 31618061-31619060 Medicago truncatula
Medtr6g084450 2.0kb upstream 2.0kb upstream 8573 true chr6: 31619061-31627633 Medicago truncatula
Medtr6g084450 2.0kb upstream 2.0kb upstream 2000 false chr6: 31625634-31627633 Medicago truncatula
Medtr6g084450 2.0kb downstream 2.0kb downstream 8573 true chr6: 31617061-31625633 Medicago truncatula
Medtr6g084450 2.0kb downstream 2.0kb downstream 2000 false chr6: 31617061-31619060 Medicago truncatula
Medtr6g084450 5.0kb upstream 5.0kb upstream 11573 true chr6: 31619061-31630633 Medicago truncatula
Medtr6g084450 5.0kb upstream 5.0kb upstream 5000 false chr6: 31625634-31630633 Medicago truncatula
Medtr6g084450 5.0kb downstream 5.0kb downstream 11573 true chr6: 31614061-31625633 Medicago truncatula
Medtr6g084450 5.0kb downstream 5.0kb downstream 5000 false chr6: 31614061-31619060 Medicago truncatula
Medtr6g084450 10.0kb upstream 10.0kb upstream 16573 true chr6: 31619061-31635633 Medicago truncatula
Medtr6g084450 10.0kb upstream 10.0kb upstream 10000 false chr6: 31625634-31635633 Medicago truncatula
Medtr6g084450 10.0kb downstream 10.0kb downstream 16573 true chr6: 31609061-31625633 Medicago truncatula
Medtr6g084450 10.0kb downstream 10.0kb downstream 10000 false chr6: 31609061-31619060 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311844 5265 Fabidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.623     High  
cufflinks 12.968     High  
cufflinks 12.383     High  
cufflinks 16.559     High  
cufflinks 14.411     High  
cufflinks 9.429       Low
cufflinks 15.983     High  
cufflinks 13.161     High  
cufflinks 21.318     High High

0 Strain