Gene : Medtr6g083940 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12947:SF10 - AMSH-LIKE UBIQUITIN THIOESTERASE 1 Description:  AMSH-like ubiquitin thioesterase
Genomic Order:  3401 Name:  ? Medtr6g083940
Secondary Identifier:  ? PAC:31105130
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g083940 0.5kb upstream 0.5kb upstream 7685 true chr6: 31333153-31340837 Medicago truncatula
Medtr6g083940 0.5kb upstream 0.5kb upstream 500 false chr6: 31340338-31340837 Medicago truncatula
Medtr6g083940 0.5kb downstream 0.5kb downstream 7685 true chr6: 31332653-31340337 Medicago truncatula
Medtr6g083940 0.5kb downstream 0.5kb downstream 500 false chr6: 31332653-31333152 Medicago truncatula
Medtr6g083940 1.0kb upstream 1.0kb upstream 8185 true chr6: 31333153-31341337 Medicago truncatula
Medtr6g083940 1.0kb upstream 1.0kb upstream 1000 false chr6: 31340338-31341337 Medicago truncatula
Medtr6g083940 1.0kb downstream 1.0kb downstream 8185 true chr6: 31332153-31340337 Medicago truncatula
Medtr6g083940 1.0kb downstream 1.0kb downstream 1000 false chr6: 31332153-31333152 Medicago truncatula
Medtr6g083940 2.0kb upstream 2.0kb upstream 9185 true chr6: 31333153-31342337 Medicago truncatula
Medtr6g083940 2.0kb upstream 2.0kb upstream 2000 false chr6: 31340338-31342337 Medicago truncatula
Medtr6g083940 2.0kb downstream 2.0kb downstream 9185 true chr6: 31331153-31340337 Medicago truncatula
Medtr6g083940 2.0kb downstream 2.0kb downstream 2000 false chr6: 31331153-31333152 Medicago truncatula
Medtr6g083940 5.0kb upstream 5.0kb upstream 12185 true chr6: 31333153-31345337 Medicago truncatula
Medtr6g083940 5.0kb upstream 5.0kb upstream 5000 false chr6: 31340338-31345337 Medicago truncatula
Medtr6g083940 5.0kb downstream 5.0kb downstream 12185 true chr6: 31328153-31340337 Medicago truncatula
Medtr6g083940 5.0kb downstream 5.0kb downstream 5000 false chr6: 31328153-31333152 Medicago truncatula
Medtr6g083940 10.0kb upstream 10.0kb upstream 17185 true chr6: 31333153-31350337 Medicago truncatula
Medtr6g083940 10.0kb upstream 10.0kb upstream 10000 false chr6: 31340338-31350337 Medicago truncatula
Medtr6g083940 10.0kb downstream 10.0kb downstream 17185 true chr6: 31323153-31340337 Medicago truncatula
Medtr6g083940 10.0kb downstream 10.0kb downstream 10000 false chr6: 31323153-31333152 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310109 5265 Fabidae View MSA
124064531 5270 Rosid View MSA
123740855 5271 Pentapetalae View MSA
122786605 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.701        
cufflinks 1.756        
cufflinks 2.012        
cufflinks 1.373        
cufflinks 1.594        
cufflinks 0.918       Low
cufflinks 2.066       High
cufflinks 1.569        
cufflinks 1.648        

0 Strain