Gene : Medtr6g083920 M. truncatula Mt4.0v1
Defline:  (1 of 12) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Description:  DUF1639 family protein
Genomic Order:  3399 Name:  ? Medtr6g083920
Secondary Identifier:  ? PAC:31101887
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g083920 0.5kb upstream 0.5kb upstream 3213 true chr6: 31320402-31323614 Medicago truncatula
Medtr6g083920 0.5kb upstream 0.5kb upstream 500 false chr6: 31320402-31320901 Medicago truncatula
Medtr6g083920 0.5kb downstream 0.5kb downstream 3213 true chr6: 31320902-31324114 Medicago truncatula
Medtr6g083920 0.5kb downstream 0.5kb downstream 500 false chr6: 31323615-31324114 Medicago truncatula
Medtr6g083920 1.0kb upstream 1.0kb upstream 3713 true chr6: 31319902-31323614 Medicago truncatula
Medtr6g083920 1.0kb upstream 1.0kb upstream 1000 false chr6: 31319902-31320901 Medicago truncatula
Medtr6g083920 1.0kb downstream 1.0kb downstream 3713 true chr6: 31320902-31324614 Medicago truncatula
Medtr6g083920 1.0kb downstream 1.0kb downstream 1000 false chr6: 31323615-31324614 Medicago truncatula
Medtr6g083920 2.0kb upstream 2.0kb upstream 4713 true chr6: 31318902-31323614 Medicago truncatula
Medtr6g083920 2.0kb upstream 2.0kb upstream 2000 false chr6: 31318902-31320901 Medicago truncatula
Medtr6g083920 2.0kb downstream 2.0kb downstream 4713 true chr6: 31320902-31325614 Medicago truncatula
Medtr6g083920 2.0kb downstream 2.0kb downstream 2000 false chr6: 31323615-31325614 Medicago truncatula
Medtr6g083920 5.0kb upstream 5.0kb upstream 7713 true chr6: 31315902-31323614 Medicago truncatula
Medtr6g083920 5.0kb upstream 5.0kb upstream 5000 false chr6: 31315902-31320901 Medicago truncatula
Medtr6g083920 5.0kb downstream 5.0kb downstream 7713 true chr6: 31320902-31328614 Medicago truncatula
Medtr6g083920 5.0kb downstream 5.0kb downstream 5000 false chr6: 31323615-31328614 Medicago truncatula
Medtr6g083920 10.0kb upstream 10.0kb upstream 12713 true chr6: 31310902-31323614 Medicago truncatula
Medtr6g083920 10.0kb upstream 10.0kb upstream 10000 false chr6: 31310902-31320901 Medicago truncatula
Medtr6g083920 10.0kb downstream 10.0kb downstream 12713 true chr6: 31320902-31333614 Medicago truncatula
Medtr6g083920 10.0kb downstream 10.0kb downstream 10000 false chr6: 31323615-31333614 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296677 5265 Fabidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.545     High High
cufflinks 1.256       Low
cufflinks 1.704        
cufflinks 2.98        
cufflinks 1.311        
cufflinks 2.373        
cufflinks 11.056     High High
cufflinks 1.568        
cufflinks 5.017        

0 Strain