Gene : Medtr6g086060 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10383 - SERINE INCORPORATOR Description:  serinc-domain serine and sphingolipid biosynthesis protein
Genomic Order:  3499 Name:  ? Medtr6g086060
Secondary Identifier:  ? PAC:31105572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g086060 0.5kb upstream 0.5kb upstream 8436 true chr6: 32233745-32242180 Medicago truncatula
Medtr6g086060 0.5kb upstream 0.5kb upstream 500 false chr6: 32241681-32242180 Medicago truncatula
Medtr6g086060 0.5kb downstream 0.5kb downstream 8436 true chr6: 32233245-32241680 Medicago truncatula
Medtr6g086060 0.5kb downstream 0.5kb downstream 500 false chr6: 32233245-32233744 Medicago truncatula
Medtr6g086060 1.0kb upstream 1.0kb upstream 8936 true chr6: 32233745-32242680 Medicago truncatula
Medtr6g086060 1.0kb upstream 1.0kb upstream 1000 false chr6: 32241681-32242680 Medicago truncatula
Medtr6g086060 1.0kb downstream 1.0kb downstream 8936 true chr6: 32232745-32241680 Medicago truncatula
Medtr6g086060 1.0kb downstream 1.0kb downstream 1000 false chr6: 32232745-32233744 Medicago truncatula
Medtr6g086060 2.0kb upstream 2.0kb upstream 9936 true chr6: 32233745-32243680 Medicago truncatula
Medtr6g086060 2.0kb upstream 2.0kb upstream 2000 false chr6: 32241681-32243680 Medicago truncatula
Medtr6g086060 2.0kb downstream 2.0kb downstream 9936 true chr6: 32231745-32241680 Medicago truncatula
Medtr6g086060 2.0kb downstream 2.0kb downstream 2000 false chr6: 32231745-32233744 Medicago truncatula
Medtr6g086060 5.0kb upstream 5.0kb upstream 12936 true chr6: 32233745-32246680 Medicago truncatula
Medtr6g086060 5.0kb upstream 5.0kb upstream 5000 false chr6: 32241681-32246680 Medicago truncatula
Medtr6g086060 5.0kb downstream 5.0kb downstream 12936 true chr6: 32228745-32241680 Medicago truncatula
Medtr6g086060 5.0kb downstream 5.0kb downstream 5000 false chr6: 32228745-32233744 Medicago truncatula
Medtr6g086060 10.0kb upstream 10.0kb upstream 17936 true chr6: 32233745-32251680 Medicago truncatula
Medtr6g086060 10.0kb upstream 10.0kb upstream 10000 false chr6: 32241681-32251680 Medicago truncatula
Medtr6g086060 10.0kb downstream 10.0kb downstream 17936 true chr6: 32223745-32241680 Medicago truncatula
Medtr6g086060 10.0kb downstream 10.0kb downstream 10000 false chr6: 32223745-32233744 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297283 5265 Fabidae View MSA
124063391 5270 Rosid View MSA
123751443 5271 Pentapetalae View MSA
122793725 5272 Eudicot View MSA
122046221 5273 Angiosperm View MSA
121344586 5274 Embryophyte View MSA
123424460 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.686        
cufflinks 0.565        
cufflinks 0.397        
cufflinks 0.021     Low Low
cufflinks 0.523        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.375        
cufflinks 0.018     Low Low

0 Strain