Gene : Medtr6g084890 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR10629:SF30 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT1-RELATED Description:  DNA (cytosine-5)-methyltransferase CMT3-like protein
Genomic Order:  3464 Name:  ? Medtr6g084890
Secondary Identifier:  ? PAC:31104629
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g084890 0.5kb upstream 0.5kb upstream 6425 true chr6: 31938699-31945123 Medicago truncatula
Medtr6g084890 0.5kb upstream 0.5kb upstream 500 false chr6: 31944624-31945123 Medicago truncatula
Medtr6g084890 0.5kb downstream 0.5kb downstream 6425 true chr6: 31938199-31944623 Medicago truncatula
Medtr6g084890 0.5kb downstream 0.5kb downstream 500 false chr6: 31938199-31938698 Medicago truncatula
Medtr6g084890 1.0kb upstream 1.0kb upstream 6925 true chr6: 31938699-31945623 Medicago truncatula
Medtr6g084890 1.0kb upstream 1.0kb upstream 1000 false chr6: 31944624-31945623 Medicago truncatula
Medtr6g084890 1.0kb downstream 1.0kb downstream 6925 true chr6: 31937699-31944623 Medicago truncatula
Medtr6g084890 1.0kb downstream 1.0kb downstream 1000 false chr6: 31937699-31938698 Medicago truncatula
Medtr6g084890 2.0kb upstream 2.0kb upstream 7925 true chr6: 31938699-31946623 Medicago truncatula
Medtr6g084890 2.0kb upstream 2.0kb upstream 2000 false chr6: 31944624-31946623 Medicago truncatula
Medtr6g084890 2.0kb downstream 2.0kb downstream 7925 true chr6: 31936699-31944623 Medicago truncatula
Medtr6g084890 2.0kb downstream 2.0kb downstream 2000 false chr6: 31936699-31938698 Medicago truncatula
Medtr6g084890 5.0kb upstream 5.0kb upstream 10925 true chr6: 31938699-31949623 Medicago truncatula
Medtr6g084890 5.0kb upstream 5.0kb upstream 5000 false chr6: 31944624-31949623 Medicago truncatula
Medtr6g084890 5.0kb downstream 5.0kb downstream 10925 true chr6: 31933699-31944623 Medicago truncatula
Medtr6g084890 5.0kb downstream 5.0kb downstream 5000 false chr6: 31933699-31938698 Medicago truncatula
Medtr6g084890 10.0kb upstream 10.0kb upstream 15925 true chr6: 31938699-31954623 Medicago truncatula
Medtr6g084890 10.0kb upstream 10.0kb upstream 10000 false chr6: 31944624-31954623 Medicago truncatula
Medtr6g084890 10.0kb downstream 10.0kb downstream 15925 true chr6: 31928699-31944623 Medicago truncatula
Medtr6g084890 10.0kb downstream 10.0kb downstream 10000 false chr6: 31928699-31938698 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297560 5265 Fabidae View MSA
124071027 5270 Rosid View MSA
123743070 5271 Pentapetalae View MSA
122794759 5272 Eudicot View MSA
122046536 5273 Angiosperm View MSA
121345495 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.071        
cufflinks 0.097        
cufflinks 0.068     Low  
cufflinks 0.035     Low  
cufflinks 0.078        
cufflinks 0.021     Low Low
cufflinks 0.314       High
cufflinks 0.085        
cufflinks 0.613       High

0 Strain