Gene : Medtr6g085050 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF02617 - ATP-dependent Clp protease adaptor protein ClpS (ClpS) Description:  ATP-dependent Clp protease adaptor protein ClpS
Genomic Order:  3475 Name:  ? Medtr6g085050
Secondary Identifier:  ? PAC:31103901
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g085050 0.5kb upstream 0.5kb upstream 3690 true chr6: 32049206-32052895 Medicago truncatula
Medtr6g085050 0.5kb upstream 0.5kb upstream 500 false chr6: 32052396-32052895 Medicago truncatula
Medtr6g085050 0.5kb downstream 0.5kb downstream 3690 true chr6: 32048706-32052395 Medicago truncatula
Medtr6g085050 0.5kb downstream 0.5kb downstream 500 false chr6: 32048706-32049205 Medicago truncatula
Medtr6g085050 1.0kb upstream 1.0kb upstream 4190 true chr6: 32049206-32053395 Medicago truncatula
Medtr6g085050 1.0kb upstream 1.0kb upstream 1000 false chr6: 32052396-32053395 Medicago truncatula
Medtr6g085050 1.0kb downstream 1.0kb downstream 4190 true chr6: 32048206-32052395 Medicago truncatula
Medtr6g085050 1.0kb downstream 1.0kb downstream 1000 false chr6: 32048206-32049205 Medicago truncatula
Medtr6g085050 2.0kb upstream 2.0kb upstream 5190 true chr6: 32049206-32054395 Medicago truncatula
Medtr6g085050 2.0kb upstream 2.0kb upstream 2000 false chr6: 32052396-32054395 Medicago truncatula
Medtr6g085050 2.0kb downstream 2.0kb downstream 5190 true chr6: 32047206-32052395 Medicago truncatula
Medtr6g085050 2.0kb downstream 2.0kb downstream 2000 false chr6: 32047206-32049205 Medicago truncatula
Medtr6g085050 5.0kb upstream 5.0kb upstream 8190 true chr6: 32049206-32057395 Medicago truncatula
Medtr6g085050 5.0kb upstream 5.0kb upstream 5000 false chr6: 32052396-32057395 Medicago truncatula
Medtr6g085050 5.0kb downstream 5.0kb downstream 8190 true chr6: 32044206-32052395 Medicago truncatula
Medtr6g085050 5.0kb downstream 5.0kb downstream 5000 false chr6: 32044206-32049205 Medicago truncatula
Medtr6g085050 10.0kb upstream 10.0kb upstream 13190 true chr6: 32049206-32062395 Medicago truncatula
Medtr6g085050 10.0kb upstream 10.0kb upstream 10000 false chr6: 32052396-32062395 Medicago truncatula
Medtr6g085050 10.0kb downstream 10.0kb downstream 13190 true chr6: 32039206-32052395 Medicago truncatula
Medtr6g085050 10.0kb downstream 10.0kb downstream 10000 false chr6: 32039206-32049205 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306268 5265 Fabidae View MSA
124067434 5270 Rosid View MSA
123745289 5271 Pentapetalae View MSA
122787169 5272 Eudicot View MSA
122042739 5273 Angiosperm View MSA
121350486 5274 Embryophyte View MSA
123426220 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 15.673     High High
cufflinks 8.025        
cufflinks 0.172        
cufflinks 15.232     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 10.217     High  
cufflinks 0.06     Low  

0 Strain