Gene : Medtr6g085000 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11278 - 40S RIBOSOMAL PROTEIN S7 Description:  40S ribosomal S7-like protein
Genomic Order:  3472 Name:  ? Medtr6g085000
Secondary Identifier:  ? PAC:31105327
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g085000 0.5kb upstream 0.5kb upstream 3850 true chr6: 32013120-32016969 Medicago truncatula
Medtr6g085000 0.5kb upstream 0.5kb upstream 500 false chr6: 32013120-32013619 Medicago truncatula
Medtr6g085000 0.5kb downstream 0.5kb downstream 3850 true chr6: 32013620-32017469 Medicago truncatula
Medtr6g085000 0.5kb downstream 0.5kb downstream 500 false chr6: 32016970-32017469 Medicago truncatula
Medtr6g085000 1.0kb upstream 1.0kb upstream 4350 true chr6: 32012620-32016969 Medicago truncatula
Medtr6g085000 1.0kb upstream 1.0kb upstream 1000 false chr6: 32012620-32013619 Medicago truncatula
Medtr6g085000 1.0kb downstream 1.0kb downstream 4350 true chr6: 32013620-32017969 Medicago truncatula
Medtr6g085000 1.0kb downstream 1.0kb downstream 1000 false chr6: 32016970-32017969 Medicago truncatula
Medtr6g085000 2.0kb upstream 2.0kb upstream 5350 true chr6: 32011620-32016969 Medicago truncatula
Medtr6g085000 2.0kb upstream 2.0kb upstream 2000 false chr6: 32011620-32013619 Medicago truncatula
Medtr6g085000 2.0kb downstream 2.0kb downstream 5350 true chr6: 32013620-32018969 Medicago truncatula
Medtr6g085000 2.0kb downstream 2.0kb downstream 2000 false chr6: 32016970-32018969 Medicago truncatula
Medtr6g085000 5.0kb upstream 5.0kb upstream 8350 true chr6: 32008620-32016969 Medicago truncatula
Medtr6g085000 5.0kb upstream 5.0kb upstream 5000 false chr6: 32008620-32013619 Medicago truncatula
Medtr6g085000 5.0kb downstream 5.0kb downstream 8350 true chr6: 32013620-32021969 Medicago truncatula
Medtr6g085000 5.0kb downstream 5.0kb downstream 5000 false chr6: 32016970-32021969 Medicago truncatula
Medtr6g085000 10.0kb upstream 10.0kb upstream 13350 true chr6: 32003620-32016969 Medicago truncatula
Medtr6g085000 10.0kb upstream 10.0kb upstream 10000 false chr6: 32003620-32013619 Medicago truncatula
Medtr6g085000 10.0kb downstream 10.0kb downstream 13350 true chr6: 32013620-32026969 Medicago truncatula
Medtr6g085000 10.0kb downstream 10.0kb downstream 10000 false chr6: 32016970-32026969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309185 5265 Fabidae View MSA
124072179 5270 Rosid View MSA
123738806 5271 Pentapetalae View MSA
122790365 5272 Eudicot View MSA
122049624 5273 Angiosperm View MSA
121350369 5274 Embryophyte View MSA
123424764 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.349     High  
cufflinks 29.923     High Low
cufflinks 36.703     High  
cufflinks 82.311     High High
cufflinks 48.58     High  
cufflinks 26.848     High Low
cufflinks 73.22     High  
cufflinks 39.969     High  
cufflinks 97.419     High High

0 Strain