Gene : Medtr6g086600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23264:SF29 - PROTEIN HIGH CHLOROPHYLL FLUORESCENCE 101 Description:  nucleotide-binding protein
Genomic Order:  3486 Name:  ? Medtr6g086600
Secondary Identifier:  ? PAC:31101788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g086600 0.5kb upstream 0.5kb upstream 6387 true chr6: 32166446-32172832 Medicago truncatula
Medtr6g086600 0.5kb upstream 0.5kb upstream 500 false chr6: 32172333-32172832 Medicago truncatula
Medtr6g086600 0.5kb downstream 0.5kb downstream 6387 true chr6: 32165946-32172332 Medicago truncatula
Medtr6g086600 0.5kb downstream 0.5kb downstream 500 false chr6: 32165946-32166445 Medicago truncatula
Medtr6g086600 1.0kb upstream 1.0kb upstream 6887 true chr6: 32166446-32173332 Medicago truncatula
Medtr6g086600 1.0kb upstream 1.0kb upstream 1000 false chr6: 32172333-32173332 Medicago truncatula
Medtr6g086600 1.0kb downstream 1.0kb downstream 6887 true chr6: 32165446-32172332 Medicago truncatula
Medtr6g086600 1.0kb downstream 1.0kb downstream 1000 false chr6: 32165446-32166445 Medicago truncatula
Medtr6g086600 2.0kb upstream 2.0kb upstream 7887 true chr6: 32166446-32174332 Medicago truncatula
Medtr6g086600 2.0kb upstream 2.0kb upstream 2000 false chr6: 32172333-32174332 Medicago truncatula
Medtr6g086600 2.0kb downstream 2.0kb downstream 7887 true chr6: 32164446-32172332 Medicago truncatula
Medtr6g086600 2.0kb downstream 2.0kb downstream 2000 false chr6: 32164446-32166445 Medicago truncatula
Medtr6g086600 5.0kb upstream 5.0kb upstream 10887 true chr6: 32166446-32177332 Medicago truncatula
Medtr6g086600 5.0kb upstream 5.0kb upstream 5000 false chr6: 32172333-32177332 Medicago truncatula
Medtr6g086600 5.0kb downstream 5.0kb downstream 10887 true chr6: 32161446-32172332 Medicago truncatula
Medtr6g086600 5.0kb downstream 5.0kb downstream 5000 false chr6: 32161446-32166445 Medicago truncatula
Medtr6g086600 10.0kb upstream 10.0kb upstream 15887 true chr6: 32166446-32182332 Medicago truncatula
Medtr6g086600 10.0kb upstream 10.0kb upstream 10000 false chr6: 32172333-32182332 Medicago truncatula
Medtr6g086600 10.0kb downstream 10.0kb downstream 15887 true chr6: 32156446-32172332 Medicago truncatula
Medtr6g086600 10.0kb downstream 10.0kb downstream 10000 false chr6: 32156446-32166445 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312622 5265 Fabidae View MSA
124072691 5270 Rosid View MSA
123738280 5271 Pentapetalae View MSA
122788075 5272 Eudicot View MSA
122042012 5273 Angiosperm View MSA
121347144 5274 Embryophyte View MSA
123424457 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 15.273     High High
cufflinks 10.714     High  
cufflinks 0.064     Low  
cufflinks 13.634     High High
cufflinks 0.016     Low Low
cufflinks 0.128        
cufflinks 13.89     High High
cufflinks 0.131        

0 Strain