Gene : Medtr6g086560 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Description:  sigma factor sigb regulation protein rsbq protein, putative
Genomic Order:  3483 Name:  ? Medtr6g086560
Secondary Identifier:  ? PAC:31103943
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g086560 0.5kb upstream 0.5kb upstream 4937 true chr6: 32148021-32152957 Medicago truncatula
Medtr6g086560 0.5kb upstream 0.5kb upstream 500 false chr6: 32152458-32152957 Medicago truncatula
Medtr6g086560 0.5kb downstream 0.5kb downstream 4937 true chr6: 32147521-32152457 Medicago truncatula
Medtr6g086560 0.5kb downstream 0.5kb downstream 500 false chr6: 32147521-32148020 Medicago truncatula
Medtr6g086560 1.0kb upstream 1.0kb upstream 5437 true chr6: 32148021-32153457 Medicago truncatula
Medtr6g086560 1.0kb upstream 1.0kb upstream 1000 false chr6: 32152458-32153457 Medicago truncatula
Medtr6g086560 1.0kb downstream 1.0kb downstream 5437 true chr6: 32147021-32152457 Medicago truncatula
Medtr6g086560 1.0kb downstream 1.0kb downstream 1000 false chr6: 32147021-32148020 Medicago truncatula
Medtr6g086560 2.0kb upstream 2.0kb upstream 6437 true chr6: 32148021-32154457 Medicago truncatula
Medtr6g086560 2.0kb upstream 2.0kb upstream 2000 false chr6: 32152458-32154457 Medicago truncatula
Medtr6g086560 2.0kb downstream 2.0kb downstream 6437 true chr6: 32146021-32152457 Medicago truncatula
Medtr6g086560 2.0kb downstream 2.0kb downstream 2000 false chr6: 32146021-32148020 Medicago truncatula
Medtr6g086560 5.0kb upstream 5.0kb upstream 9437 true chr6: 32148021-32157457 Medicago truncatula
Medtr6g086560 5.0kb upstream 5.0kb upstream 5000 false chr6: 32152458-32157457 Medicago truncatula
Medtr6g086560 5.0kb downstream 5.0kb downstream 9437 true chr6: 32143021-32152457 Medicago truncatula
Medtr6g086560 5.0kb downstream 5.0kb downstream 5000 false chr6: 32143021-32148020 Medicago truncatula
Medtr6g086560 10.0kb upstream 10.0kb upstream 14437 true chr6: 32148021-32162457 Medicago truncatula
Medtr6g086560 10.0kb upstream 10.0kb upstream 10000 false chr6: 32152458-32162457 Medicago truncatula
Medtr6g086560 10.0kb downstream 10.0kb downstream 14437 true chr6: 32138021-32152457 Medicago truncatula
Medtr6g086560 10.0kb downstream 10.0kb downstream 10000 false chr6: 32138021-32148020 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307967 5265 Fabidae View MSA
124066716 5270 Rosid View MSA
123750652 5271 Pentapetalae View MSA
122793074 5272 Eudicot View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.679        
cufflinks 34.839     High High
cufflinks 21.223     High  
cufflinks 1.274        
cufflinks 29.455     High High
cufflinks 1.472        
cufflinks 1.118        
cufflinks 22.82     High  
cufflinks 0.439       Low

0 Strain