Gene : Medtr6g087140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31413:SF2 - AFP HOMOLOG 2 Description:  ninja-family protein mc410
Genomic Order:  3663 Name:  ? Medtr6g087140
Secondary Identifier:  ? PAC:31104267
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g087140 0.5kb upstream 0.5kb upstream 4241 true chr6: 33504351-33508591 Medicago truncatula
Medtr6g087140 0.5kb upstream 0.5kb upstream 500 false chr6: 33504351-33504850 Medicago truncatula
Medtr6g087140 0.5kb downstream 0.5kb downstream 4241 true chr6: 33504851-33509091 Medicago truncatula
Medtr6g087140 0.5kb downstream 0.5kb downstream 500 false chr6: 33508592-33509091 Medicago truncatula
Medtr6g087140 1.0kb upstream 1.0kb upstream 4741 true chr6: 33503851-33508591 Medicago truncatula
Medtr6g087140 1.0kb upstream 1.0kb upstream 1000 false chr6: 33503851-33504850 Medicago truncatula
Medtr6g087140 1.0kb downstream 1.0kb downstream 4741 true chr6: 33504851-33509591 Medicago truncatula
Medtr6g087140 1.0kb downstream 1.0kb downstream 1000 false chr6: 33508592-33509591 Medicago truncatula
Medtr6g087140 2.0kb upstream 2.0kb upstream 5741 true chr6: 33502851-33508591 Medicago truncatula
Medtr6g087140 2.0kb upstream 2.0kb upstream 2000 false chr6: 33502851-33504850 Medicago truncatula
Medtr6g087140 2.0kb downstream 2.0kb downstream 5741 true chr6: 33504851-33510591 Medicago truncatula
Medtr6g087140 2.0kb downstream 2.0kb downstream 2000 false chr6: 33508592-33510591 Medicago truncatula
Medtr6g087140 5.0kb upstream 5.0kb upstream 8741 true chr6: 33499851-33508591 Medicago truncatula
Medtr6g087140 5.0kb upstream 5.0kb upstream 5000 false chr6: 33499851-33504850 Medicago truncatula
Medtr6g087140 5.0kb downstream 5.0kb downstream 8741 true chr6: 33504851-33513591 Medicago truncatula
Medtr6g087140 5.0kb downstream 5.0kb downstream 5000 false chr6: 33508592-33513591 Medicago truncatula
Medtr6g087140 10.0kb upstream 10.0kb upstream 13741 true chr6: 33494851-33508591 Medicago truncatula
Medtr6g087140 10.0kb upstream 10.0kb upstream 10000 false chr6: 33494851-33504850 Medicago truncatula
Medtr6g087140 10.0kb downstream 10.0kb downstream 13741 true chr6: 33504851-33518591 Medicago truncatula
Medtr6g087140 10.0kb downstream 10.0kb downstream 10000 false chr6: 33508592-33518591 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302818 5265 Fabidae View MSA
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.419        
cufflinks 1.408        
cufflinks 1.546        
cufflinks 1.453        
cufflinks 1.522        
cufflinks 0.498       Low
cufflinks 2.148        
cufflinks 1.369        
cufflinks 2.893       High

0 Strain