Gene : Medtr6g088545 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR33265:SF8 - F5F19.20 PROTEIN Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  3682 Name:  ? Medtr6g088545
Secondary Identifier:  ? PAC:31105301
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g088545 0.5kb upstream 0.5kb upstream 1091 true chr6: 33685407-33686497 Medicago truncatula
Medtr6g088545 0.5kb upstream 0.5kb upstream 500 false chr6: 33685998-33686497 Medicago truncatula
Medtr6g088545 0.5kb downstream 0.5kb downstream 1091 true chr6: 33684907-33685997 Medicago truncatula
Medtr6g088545 0.5kb downstream 0.5kb downstream 500 false chr6: 33684907-33685406 Medicago truncatula
Medtr6g088545 1.0kb upstream 1.0kb upstream 1591 true chr6: 33685407-33686997 Medicago truncatula
Medtr6g088545 1.0kb upstream 1.0kb upstream 1000 false chr6: 33685998-33686997 Medicago truncatula
Medtr6g088545 1.0kb downstream 1.0kb downstream 1591 true chr6: 33684407-33685997 Medicago truncatula
Medtr6g088545 1.0kb downstream 1.0kb downstream 1000 false chr6: 33684407-33685406 Medicago truncatula
Medtr6g088545 2.0kb upstream 2.0kb upstream 2591 true chr6: 33685407-33687997 Medicago truncatula
Medtr6g088545 2.0kb upstream 2.0kb upstream 2000 false chr6: 33685998-33687997 Medicago truncatula
Medtr6g088545 2.0kb downstream 2.0kb downstream 2591 true chr6: 33683407-33685997 Medicago truncatula
Medtr6g088545 2.0kb downstream 2.0kb downstream 2000 false chr6: 33683407-33685406 Medicago truncatula
Medtr6g088545 5.0kb upstream 5.0kb upstream 5591 true chr6: 33685407-33690997 Medicago truncatula
Medtr6g088545 5.0kb upstream 5.0kb upstream 5000 false chr6: 33685998-33690997 Medicago truncatula
Medtr6g088545 5.0kb downstream 5.0kb downstream 5591 true chr6: 33680407-33685997 Medicago truncatula
Medtr6g088545 5.0kb downstream 5.0kb downstream 5000 false chr6: 33680407-33685406 Medicago truncatula
Medtr6g088545 10.0kb upstream 10.0kb upstream 10591 true chr6: 33685407-33695997 Medicago truncatula
Medtr6g088545 10.0kb upstream 10.0kb upstream 10000 false chr6: 33685998-33695997 Medicago truncatula
Medtr6g088545 10.0kb downstream 10.0kb downstream 10591 true chr6: 33675407-33685997 Medicago truncatula
Medtr6g088545 10.0kb downstream 10.0kb downstream 10000 false chr6: 33675407-33685406 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.679        
cufflinks 0.251        
cufflinks 0.14       Low
cufflinks 1.422        
cufflinks 0.18       Low
cufflinks 2.61       High
cufflinks 1.499        
cufflinks 0.184        
cufflinks 1.215        

0 Strain