Gene : Medtr6g088525 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR33265:SF8 - F5F19.20 PROTEIN Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  3681 Name:  ? Medtr6g088525
Secondary Identifier:  ? PAC:31104058
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g088525 0.5kb upstream 0.5kb upstream 1686 true chr6: 33673752-33675437 Medicago truncatula
Medtr6g088525 0.5kb upstream 0.5kb upstream 500 false chr6: 33674938-33675437 Medicago truncatula
Medtr6g088525 0.5kb downstream 0.5kb downstream 1686 true chr6: 33673252-33674937 Medicago truncatula
Medtr6g088525 0.5kb downstream 0.5kb downstream 500 false chr6: 33673252-33673751 Medicago truncatula
Medtr6g088525 1.0kb upstream 1.0kb upstream 2186 true chr6: 33673752-33675937 Medicago truncatula
Medtr6g088525 1.0kb upstream 1.0kb upstream 1000 false chr6: 33674938-33675937 Medicago truncatula
Medtr6g088525 1.0kb downstream 1.0kb downstream 2186 true chr6: 33672752-33674937 Medicago truncatula
Medtr6g088525 1.0kb downstream 1.0kb downstream 1000 false chr6: 33672752-33673751 Medicago truncatula
Medtr6g088525 2.0kb upstream 2.0kb upstream 3186 true chr6: 33673752-33676937 Medicago truncatula
Medtr6g088525 2.0kb upstream 2.0kb upstream 2000 false chr6: 33674938-33676937 Medicago truncatula
Medtr6g088525 2.0kb downstream 2.0kb downstream 3186 true chr6: 33671752-33674937 Medicago truncatula
Medtr6g088525 2.0kb downstream 2.0kb downstream 2000 false chr6: 33671752-33673751 Medicago truncatula
Medtr6g088525 5.0kb upstream 5.0kb upstream 6186 true chr6: 33673752-33679937 Medicago truncatula
Medtr6g088525 5.0kb upstream 5.0kb upstream 5000 false chr6: 33674938-33679937 Medicago truncatula
Medtr6g088525 5.0kb downstream 5.0kb downstream 6186 true chr6: 33668752-33674937 Medicago truncatula
Medtr6g088525 5.0kb downstream 5.0kb downstream 5000 false chr6: 33668752-33673751 Medicago truncatula
Medtr6g088525 10.0kb upstream 10.0kb upstream 11186 true chr6: 33673752-33684937 Medicago truncatula
Medtr6g088525 10.0kb upstream 10.0kb upstream 10000 false chr6: 33674938-33684937 Medicago truncatula
Medtr6g088525 10.0kb downstream 10.0kb downstream 11186 true chr6: 33663752-33674937 Medicago truncatula
Medtr6g088525 10.0kb downstream 10.0kb downstream 10000 false chr6: 33663752-33673751 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.154       Low
cufflinks 0.603        
cufflinks 0.314        
cufflinks 3.328       High
cufflinks 0.476        
cufflinks 1.631        
cufflinks 1.382        
cufflinks 0.326        
cufflinks 1.206        

0 Strain