Gene : Medtr6g088565 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR33265:SF8 - F5F19.20 PROTEIN Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  3683 Name:  ? Medtr6g088565
Secondary Identifier:  ? PAC:31102782
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g088565 0.5kb upstream 0.5kb upstream 1088 true chr6: 33692637-33693724 Medicago truncatula
Medtr6g088565 0.5kb upstream 0.5kb upstream 500 false chr6: 33693225-33693724 Medicago truncatula
Medtr6g088565 0.5kb downstream 0.5kb downstream 1088 true chr6: 33692137-33693224 Medicago truncatula
Medtr6g088565 0.5kb downstream 0.5kb downstream 500 false chr6: 33692137-33692636 Medicago truncatula
Medtr6g088565 1.0kb upstream 1.0kb upstream 1588 true chr6: 33692637-33694224 Medicago truncatula
Medtr6g088565 1.0kb upstream 1.0kb upstream 1000 false chr6: 33693225-33694224 Medicago truncatula
Medtr6g088565 1.0kb downstream 1.0kb downstream 1588 true chr6: 33691637-33693224 Medicago truncatula
Medtr6g088565 1.0kb downstream 1.0kb downstream 1000 false chr6: 33691637-33692636 Medicago truncatula
Medtr6g088565 2.0kb upstream 2.0kb upstream 2588 true chr6: 33692637-33695224 Medicago truncatula
Medtr6g088565 2.0kb upstream 2.0kb upstream 2000 false chr6: 33693225-33695224 Medicago truncatula
Medtr6g088565 2.0kb downstream 2.0kb downstream 2588 true chr6: 33690637-33693224 Medicago truncatula
Medtr6g088565 2.0kb downstream 2.0kb downstream 2000 false chr6: 33690637-33692636 Medicago truncatula
Medtr6g088565 5.0kb upstream 5.0kb upstream 5588 true chr6: 33692637-33698224 Medicago truncatula
Medtr6g088565 5.0kb upstream 5.0kb upstream 5000 false chr6: 33693225-33698224 Medicago truncatula
Medtr6g088565 5.0kb downstream 5.0kb downstream 5588 true chr6: 33687637-33693224 Medicago truncatula
Medtr6g088565 5.0kb downstream 5.0kb downstream 5000 false chr6: 33687637-33692636 Medicago truncatula
Medtr6g088565 10.0kb upstream 10.0kb upstream 10588 true chr6: 33692637-33703224 Medicago truncatula
Medtr6g088565 10.0kb upstream 10.0kb upstream 10000 false chr6: 33693225-33703224 Medicago truncatula
Medtr6g088565 10.0kb downstream 10.0kb downstream 10588 true chr6: 33682637-33693224 Medicago truncatula
Medtr6g088565 10.0kb downstream 10.0kb downstream 10000 false chr6: 33682637-33692636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.77       High
cufflinks 0.359        
cufflinks 0.159        
cufflinks 0.387        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low Low
cufflinks 0.098        
cufflinks 0.299        

0 Strain