Gene : Medtr6g089480 M. truncatula Mt4.0v1
Defline:  (1 of 18) 2.7.1.4 - Fructokinase / D-fructokinase Description:  pfkB family carbohydrate kinase
Genomic Order:  2557 Name:  ? Medtr6g089480
Secondary Identifier:  ? PAC:31104396
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3801 Medicago truncatula pathologic  
Mtruncatula PWY-4101 Medicago truncatula pathologic  
Mtruncatula PWY-621 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g089480 0.5kb upstream 0.5kb upstream 3736 true chr6: 22689210-22692945 Medicago truncatula
Medtr6g089480 0.5kb upstream 0.5kb upstream 500 false chr6: 22689210-22689709 Medicago truncatula
Medtr6g089480 0.5kb downstream 0.5kb downstream 3736 true chr6: 22689710-22693445 Medicago truncatula
Medtr6g089480 0.5kb downstream 0.5kb downstream 500 false chr6: 22692946-22693445 Medicago truncatula
Medtr6g089480 1.0kb upstream 1.0kb upstream 4236 true chr6: 22688710-22692945 Medicago truncatula
Medtr6g089480 1.0kb upstream 1.0kb upstream 1000 false chr6: 22688710-22689709 Medicago truncatula
Medtr6g089480 1.0kb downstream 1.0kb downstream 4236 true chr6: 22689710-22693945 Medicago truncatula
Medtr6g089480 1.0kb downstream 1.0kb downstream 1000 false chr6: 22692946-22693945 Medicago truncatula
Medtr6g089480 2.0kb upstream 2.0kb upstream 5236 true chr6: 22687710-22692945 Medicago truncatula
Medtr6g089480 2.0kb upstream 2.0kb upstream 2000 false chr6: 22687710-22689709 Medicago truncatula
Medtr6g089480 2.0kb downstream 2.0kb downstream 5236 true chr6: 22689710-22694945 Medicago truncatula
Medtr6g089480 2.0kb downstream 2.0kb downstream 2000 false chr6: 22692946-22694945 Medicago truncatula
Medtr6g089480 5.0kb upstream 5.0kb upstream 8236 true chr6: 22684710-22692945 Medicago truncatula
Medtr6g089480 5.0kb upstream 5.0kb upstream 5000 false chr6: 22684710-22689709 Medicago truncatula
Medtr6g089480 5.0kb downstream 5.0kb downstream 8236 true chr6: 22689710-22697945 Medicago truncatula
Medtr6g089480 5.0kb downstream 5.0kb downstream 5000 false chr6: 22692946-22697945 Medicago truncatula
Medtr6g089480 10.0kb upstream 10.0kb upstream 13236 true chr6: 22679710-22692945 Medicago truncatula
Medtr6g089480 10.0kb upstream 10.0kb upstream 10000 false chr6: 22679710-22689709 Medicago truncatula
Medtr6g089480 10.0kb downstream 10.0kb downstream 13236 true chr6: 22689710-22702945 Medicago truncatula
Medtr6g089480 10.0kb downstream 10.0kb downstream 10000 false chr6: 22692946-22702945 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.533        
cufflinks 0.441       Low
cufflinks 0.647        
cufflinks 7.475        
cufflinks 0.492       Low
cufflinks 3.724        
cufflinks 12.808     High High
cufflinks 0.414       Low
cufflinks 9.643        

0 Strain