Gene : Medtr6g090500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10917//PTHR10917:SF1 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Description:  DNA-directed RNA polymerase I, II
Genomic Order:  3720 Name:  ? Medtr6g090500
Secondary Identifier:  ? PAC:31101725
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g090500 0.5kb upstream 0.5kb upstream 3913 true chr6: 34012388-34016300 Medicago truncatula
Medtr6g090500 0.5kb upstream 0.5kb upstream 500 false chr6: 34012388-34012887 Medicago truncatula
Medtr6g090500 0.5kb downstream 0.5kb downstream 3913 true chr6: 34012888-34016800 Medicago truncatula
Medtr6g090500 0.5kb downstream 0.5kb downstream 500 false chr6: 34016301-34016800 Medicago truncatula
Medtr6g090500 1.0kb upstream 1.0kb upstream 4413 true chr6: 34011888-34016300 Medicago truncatula
Medtr6g090500 1.0kb upstream 1.0kb upstream 1000 false chr6: 34011888-34012887 Medicago truncatula
Medtr6g090500 1.0kb downstream 1.0kb downstream 4413 true chr6: 34012888-34017300 Medicago truncatula
Medtr6g090500 1.0kb downstream 1.0kb downstream 1000 false chr6: 34016301-34017300 Medicago truncatula
Medtr6g090500 2.0kb upstream 2.0kb upstream 5413 true chr6: 34010888-34016300 Medicago truncatula
Medtr6g090500 2.0kb upstream 2.0kb upstream 2000 false chr6: 34010888-34012887 Medicago truncatula
Medtr6g090500 2.0kb downstream 2.0kb downstream 5413 true chr6: 34012888-34018300 Medicago truncatula
Medtr6g090500 2.0kb downstream 2.0kb downstream 2000 false chr6: 34016301-34018300 Medicago truncatula
Medtr6g090500 5.0kb upstream 5.0kb upstream 8413 true chr6: 34007888-34016300 Medicago truncatula
Medtr6g090500 5.0kb upstream 5.0kb upstream 5000 false chr6: 34007888-34012887 Medicago truncatula
Medtr6g090500 5.0kb downstream 5.0kb downstream 8413 true chr6: 34012888-34021300 Medicago truncatula
Medtr6g090500 5.0kb downstream 5.0kb downstream 5000 false chr6: 34016301-34021300 Medicago truncatula
Medtr6g090500 10.0kb upstream 10.0kb upstream 13413 true chr6: 34002888-34016300 Medicago truncatula
Medtr6g090500 10.0kb upstream 10.0kb upstream 10000 false chr6: 34002888-34012887 Medicago truncatula
Medtr6g090500 10.0kb downstream 10.0kb downstream 13413 true chr6: 34012888-34026300 Medicago truncatula
Medtr6g090500 10.0kb downstream 10.0kb downstream 10000 false chr6: 34016301-34026300 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302029 5265 Fabidae View MSA
124037513 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188       Low
cufflinks 0.274        
cufflinks 0.275        
cufflinks 0.313        
cufflinks 0.376        
cufflinks 0.468       High
cufflinks 0.341        
cufflinks 0.303        
cufflinks 0.485       High

0 Strain