Gene : Medtr6g069510 M. truncatula Mt4.0v1
Defline:  (1 of 27) PF03547 - Membrane transport protein (Mem_trans) Description:  auxin efflux carrier family transporter
Genomic Order:  2763 Name:  ? Medtr6g069510
Secondary Identifier:  ? PAC:31105661
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g069510 0.5kb upstream 0.5kb upstream 6120 true chr6: 25037733-25043852 Medicago truncatula
Medtr6g069510 0.5kb upstream 0.5kb upstream 500 false chr6: 25037733-25038232 Medicago truncatula
Medtr6g069510 0.5kb downstream 0.5kb downstream 6120 true chr6: 25038233-25044352 Medicago truncatula
Medtr6g069510 0.5kb downstream 0.5kb downstream 500 false chr6: 25043853-25044352 Medicago truncatula
Medtr6g069510 1.0kb upstream 1.0kb upstream 6620 true chr6: 25037233-25043852 Medicago truncatula
Medtr6g069510 1.0kb upstream 1.0kb upstream 1000 false chr6: 25037233-25038232 Medicago truncatula
Medtr6g069510 1.0kb downstream 1.0kb downstream 6620 true chr6: 25038233-25044852 Medicago truncatula
Medtr6g069510 1.0kb downstream 1.0kb downstream 1000 false chr6: 25043853-25044852 Medicago truncatula
Medtr6g069510 2.0kb upstream 2.0kb upstream 7620 true chr6: 25036233-25043852 Medicago truncatula
Medtr6g069510 2.0kb upstream 2.0kb upstream 2000 false chr6: 25036233-25038232 Medicago truncatula
Medtr6g069510 2.0kb downstream 2.0kb downstream 7620 true chr6: 25038233-25045852 Medicago truncatula
Medtr6g069510 2.0kb downstream 2.0kb downstream 2000 false chr6: 25043853-25045852 Medicago truncatula
Medtr6g069510 5.0kb upstream 5.0kb upstream 10620 true chr6: 25033233-25043852 Medicago truncatula
Medtr6g069510 5.0kb upstream 5.0kb upstream 5000 false chr6: 25033233-25038232 Medicago truncatula
Medtr6g069510 5.0kb downstream 5.0kb downstream 10620 true chr6: 25038233-25048852 Medicago truncatula
Medtr6g069510 5.0kb downstream 5.0kb downstream 5000 false chr6: 25043853-25048852 Medicago truncatula
Medtr6g069510 10.0kb upstream 10.0kb upstream 15620 true chr6: 25028233-25043852 Medicago truncatula
Medtr6g069510 10.0kb upstream 10.0kb upstream 10000 false chr6: 25028233-25038232 Medicago truncatula
Medtr6g069510 10.0kb downstream 10.0kb downstream 15620 true chr6: 25038233-25053852 Medicago truncatula
Medtr6g069510 10.0kb downstream 10.0kb downstream 10000 false chr6: 25043853-25053852 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307644 5265 Fabidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212       Low
cufflinks 2.984        
cufflinks 2.86        
cufflinks 1.457        
cufflinks 3.545        
cufflinks 0.466       Low
cufflinks 2.629        
cufflinks 1.757        
cufflinks 1.841        

0 Strain