Gene : Medtr6g069040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19139:SF30 - AQUAPORIN TIP3-1-RELATED Description:  major intrinsic protein (MIP) family transporter
Genomic Order:  2740 Name:  ? Medtr6g069040
Secondary Identifier:  ? PAC:31101904
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g069040 0.5kb upstream 0.5kb upstream 2533 true chr6: 24831848-24834380 Medicago truncatula
Medtr6g069040 0.5kb upstream 0.5kb upstream 500 false chr6: 24831848-24832347 Medicago truncatula
Medtr6g069040 0.5kb downstream 0.5kb downstream 2533 true chr6: 24832348-24834880 Medicago truncatula
Medtr6g069040 0.5kb downstream 0.5kb downstream 500 false chr6: 24834381-24834880 Medicago truncatula
Medtr6g069040 1.0kb upstream 1.0kb upstream 3033 true chr6: 24831348-24834380 Medicago truncatula
Medtr6g069040 1.0kb upstream 1.0kb upstream 1000 false chr6: 24831348-24832347 Medicago truncatula
Medtr6g069040 1.0kb downstream 1.0kb downstream 3033 true chr6: 24832348-24835380 Medicago truncatula
Medtr6g069040 1.0kb downstream 1.0kb downstream 1000 false chr6: 24834381-24835380 Medicago truncatula
Medtr6g069040 2.0kb upstream 2.0kb upstream 4033 true chr6: 24830348-24834380 Medicago truncatula
Medtr6g069040 2.0kb upstream 2.0kb upstream 2000 false chr6: 24830348-24832347 Medicago truncatula
Medtr6g069040 2.0kb downstream 2.0kb downstream 4033 true chr6: 24832348-24836380 Medicago truncatula
Medtr6g069040 2.0kb downstream 2.0kb downstream 2000 false chr6: 24834381-24836380 Medicago truncatula
Medtr6g069040 5.0kb upstream 5.0kb upstream 7033 true chr6: 24827348-24834380 Medicago truncatula
Medtr6g069040 5.0kb upstream 5.0kb upstream 5000 false chr6: 24827348-24832347 Medicago truncatula
Medtr6g069040 5.0kb downstream 5.0kb downstream 7033 true chr6: 24832348-24839380 Medicago truncatula
Medtr6g069040 5.0kb downstream 5.0kb downstream 5000 false chr6: 24834381-24839380 Medicago truncatula
Medtr6g069040 10.0kb upstream 10.0kb upstream 12033 true chr6: 24822348-24834380 Medicago truncatula
Medtr6g069040 10.0kb upstream 10.0kb upstream 10000 false chr6: 24822348-24832347 Medicago truncatula
Medtr6g069040 10.0kb downstream 10.0kb downstream 12033 true chr6: 24832348-24844380 Medicago truncatula
Medtr6g069040 10.0kb downstream 10.0kb downstream 10000 false chr6: 24834381-24844380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299531 5265 Fabidae View MSA
124064824 5270 Rosid View MSA
123744186 5271 Pentapetalae View MSA
122786235 5272 Eudicot View MSA
122044234 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain