Gene : Medtr6g075210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Description:  glutamate decarboxylase
Genomic Order:  3012 Name:  ? Medtr6g075210
Secondary Identifier:  ? PAC:31102175
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUDEG-I-PWY Medicago truncatula pathologic  
Mtruncatula PWY0-1305 Medicago truncatula pathologic  
Mtruncatula PWY-4321 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g075210 0.5kb upstream 0.5kb upstream 5027 true chr6: 27855653-27860679 Medicago truncatula
Medtr6g075210 0.5kb upstream 0.5kb upstream 500 false chr6: 27860180-27860679 Medicago truncatula
Medtr6g075210 0.5kb downstream 0.5kb downstream 5027 true chr6: 27855153-27860179 Medicago truncatula
Medtr6g075210 0.5kb downstream 0.5kb downstream 500 false chr6: 27855153-27855652 Medicago truncatula
Medtr6g075210 1.0kb upstream 1.0kb upstream 5527 true chr6: 27855653-27861179 Medicago truncatula
Medtr6g075210 1.0kb upstream 1.0kb upstream 1000 false chr6: 27860180-27861179 Medicago truncatula
Medtr6g075210 1.0kb downstream 1.0kb downstream 5527 true chr6: 27854653-27860179 Medicago truncatula
Medtr6g075210 1.0kb downstream 1.0kb downstream 1000 false chr6: 27854653-27855652 Medicago truncatula
Medtr6g075210 2.0kb upstream 2.0kb upstream 6527 true chr6: 27855653-27862179 Medicago truncatula
Medtr6g075210 2.0kb upstream 2.0kb upstream 2000 false chr6: 27860180-27862179 Medicago truncatula
Medtr6g075210 2.0kb downstream 2.0kb downstream 6527 true chr6: 27853653-27860179 Medicago truncatula
Medtr6g075210 2.0kb downstream 2.0kb downstream 2000 false chr6: 27853653-27855652 Medicago truncatula
Medtr6g075210 5.0kb upstream 5.0kb upstream 9527 true chr6: 27855653-27865179 Medicago truncatula
Medtr6g075210 5.0kb upstream 5.0kb upstream 5000 false chr6: 27860180-27865179 Medicago truncatula
Medtr6g075210 5.0kb downstream 5.0kb downstream 9527 true chr6: 27850653-27860179 Medicago truncatula
Medtr6g075210 5.0kb downstream 5.0kb downstream 5000 false chr6: 27850653-27855652 Medicago truncatula
Medtr6g075210 10.0kb upstream 10.0kb upstream 14527 true chr6: 27855653-27870179 Medicago truncatula
Medtr6g075210 10.0kb upstream 10.0kb upstream 10000 false chr6: 27860180-27870179 Medicago truncatula
Medtr6g075210 10.0kb downstream 10.0kb downstream 14527 true chr6: 27845653-27860179 Medicago truncatula
Medtr6g075210 10.0kb downstream 10.0kb downstream 10000 false chr6: 27845653-27855652 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304634 5265 Fabidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584       Low
cufflinks 14.048     High High
cufflinks 12.44     High  
cufflinks 0.946        
cufflinks 12.911     High  
cufflinks 0.491       Low
cufflinks 1.517        
cufflinks 14.883     High High
cufflinks 2.951        

0 Strain