Gene : Medtr6g077930 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF05623 - Protein of unknown function (DUF789) (DUF789) Description:  DUF789 family protein
Genomic Order:  3145 Name:  ? Medtr6g077930
Secondary Identifier:  ? PAC:31102750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g077930 0.5kb upstream 0.5kb upstream 8541 true chr6: 29269176-29277716 Medicago truncatula
Medtr6g077930 0.5kb upstream 0.5kb upstream 500 false chr6: 29277217-29277716 Medicago truncatula
Medtr6g077930 0.5kb downstream 0.5kb downstream 8541 true chr6: 29268676-29277216 Medicago truncatula
Medtr6g077930 0.5kb downstream 0.5kb downstream 500 false chr6: 29268676-29269175 Medicago truncatula
Medtr6g077930 1.0kb upstream 1.0kb upstream 9041 true chr6: 29269176-29278216 Medicago truncatula
Medtr6g077930 1.0kb upstream 1.0kb upstream 1000 false chr6: 29277217-29278216 Medicago truncatula
Medtr6g077930 1.0kb downstream 1.0kb downstream 9041 true chr6: 29268176-29277216 Medicago truncatula
Medtr6g077930 1.0kb downstream 1.0kb downstream 1000 false chr6: 29268176-29269175 Medicago truncatula
Medtr6g077930 2.0kb upstream 2.0kb upstream 10041 true chr6: 29269176-29279216 Medicago truncatula
Medtr6g077930 2.0kb upstream 2.0kb upstream 2000 false chr6: 29277217-29279216 Medicago truncatula
Medtr6g077930 2.0kb downstream 2.0kb downstream 10041 true chr6: 29267176-29277216 Medicago truncatula
Medtr6g077930 2.0kb downstream 2.0kb downstream 2000 false chr6: 29267176-29269175 Medicago truncatula
Medtr6g077930 5.0kb upstream 5.0kb upstream 13041 true chr6: 29269176-29282216 Medicago truncatula
Medtr6g077930 5.0kb upstream 5.0kb upstream 5000 false chr6: 29277217-29282216 Medicago truncatula
Medtr6g077930 5.0kb downstream 5.0kb downstream 13041 true chr6: 29264176-29277216 Medicago truncatula
Medtr6g077930 5.0kb downstream 5.0kb downstream 5000 false chr6: 29264176-29269175 Medicago truncatula
Medtr6g077930 10.0kb upstream 10.0kb upstream 18041 true chr6: 29269176-29287216 Medicago truncatula
Medtr6g077930 10.0kb upstream 10.0kb upstream 10000 false chr6: 29277217-29287216 Medicago truncatula
Medtr6g077930 10.0kb downstream 10.0kb downstream 18041 true chr6: 29259176-29277216 Medicago truncatula
Medtr6g077930 10.0kb downstream 10.0kb downstream 10000 false chr6: 29259176-29269175 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304994 5265 Fabidae View MSA
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.737        
cufflinks 2.027        
cufflinks 2.477       High
cufflinks 0.385       Low
cufflinks 2.593       High
cufflinks 0.668        
cufflinks 0.693        
cufflinks 1.93        
cufflinks 0.565       Low

0 Strain