Gene : Medtr6g079570 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  3254 Name:  ? Medtr6g079570
Secondary Identifier:  ? PAC:31102778
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g079570 0.5kb upstream 0.5kb upstream 2422 true chr6: 30019939-30022360 Medicago truncatula
Medtr6g079570 0.5kb upstream 0.5kb upstream 500 false chr6: 30021861-30022360 Medicago truncatula
Medtr6g079570 0.5kb downstream 0.5kb downstream 2422 true chr6: 30019439-30021860 Medicago truncatula
Medtr6g079570 0.5kb downstream 0.5kb downstream 500 false chr6: 30019439-30019938 Medicago truncatula
Medtr6g079570 1.0kb upstream 1.0kb upstream 2922 true chr6: 30019939-30022860 Medicago truncatula
Medtr6g079570 1.0kb upstream 1.0kb upstream 1000 false chr6: 30021861-30022860 Medicago truncatula
Medtr6g079570 1.0kb downstream 1.0kb downstream 2922 true chr6: 30018939-30021860 Medicago truncatula
Medtr6g079570 1.0kb downstream 1.0kb downstream 1000 false chr6: 30018939-30019938 Medicago truncatula
Medtr6g079570 2.0kb upstream 2.0kb upstream 3922 true chr6: 30019939-30023860 Medicago truncatula
Medtr6g079570 2.0kb upstream 2.0kb upstream 2000 false chr6: 30021861-30023860 Medicago truncatula
Medtr6g079570 2.0kb downstream 2.0kb downstream 3922 true chr6: 30017939-30021860 Medicago truncatula
Medtr6g079570 2.0kb downstream 2.0kb downstream 2000 false chr6: 30017939-30019938 Medicago truncatula
Medtr6g079570 5.0kb upstream 5.0kb upstream 6922 true chr6: 30019939-30026860 Medicago truncatula
Medtr6g079570 5.0kb upstream 5.0kb upstream 5000 false chr6: 30021861-30026860 Medicago truncatula
Medtr6g079570 5.0kb downstream 5.0kb downstream 6922 true chr6: 30014939-30021860 Medicago truncatula
Medtr6g079570 5.0kb downstream 5.0kb downstream 5000 false chr6: 30014939-30019938 Medicago truncatula
Medtr6g079570 10.0kb upstream 10.0kb upstream 11922 true chr6: 30019939-30031860 Medicago truncatula
Medtr6g079570 10.0kb upstream 10.0kb upstream 10000 false chr6: 30021861-30031860 Medicago truncatula
Medtr6g079570 10.0kb downstream 10.0kb downstream 11922 true chr6: 30009939-30021860 Medicago truncatula
Medtr6g079570 10.0kb downstream 10.0kb downstream 10000 false chr6: 30009939-30019938 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309444 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.183       Low
cufflinks 4.735        
cufflinks 3.792        
cufflinks 3.518        
cufflinks 4.982        
cufflinks 1.943       Low
cufflinks 3.311        
cufflinks 3.543        
cufflinks 8.12       High

0 Strain