Gene : Medtr6g079630 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11177//PTHR11177:SF186 - CHITINASE Description:  chitinase
Genomic Order:  3114 Name:  ? Medtr6g079630
Secondary Identifier:  ? PAC:31102957
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6902 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g079630 0.5kb upstream 0.5kb upstream 1591 true chr6: 29058020-29059610 Medicago truncatula
Medtr6g079630 0.5kb upstream 0.5kb upstream 500 false chr6: 29058020-29058519 Medicago truncatula
Medtr6g079630 0.5kb downstream 0.5kb downstream 1591 true chr6: 29058520-29060110 Medicago truncatula
Medtr6g079630 0.5kb downstream 0.5kb downstream 500 false chr6: 29059611-29060110 Medicago truncatula
Medtr6g079630 1.0kb upstream 1.0kb upstream 2091 true chr6: 29057520-29059610 Medicago truncatula
Medtr6g079630 1.0kb upstream 1.0kb upstream 1000 false chr6: 29057520-29058519 Medicago truncatula
Medtr6g079630 1.0kb downstream 1.0kb downstream 2091 true chr6: 29058520-29060610 Medicago truncatula
Medtr6g079630 1.0kb downstream 1.0kb downstream 1000 false chr6: 29059611-29060610 Medicago truncatula
Medtr6g079630 2.0kb upstream 2.0kb upstream 3091 true chr6: 29056520-29059610 Medicago truncatula
Medtr6g079630 2.0kb upstream 2.0kb upstream 2000 false chr6: 29056520-29058519 Medicago truncatula
Medtr6g079630 2.0kb downstream 2.0kb downstream 3091 true chr6: 29058520-29061610 Medicago truncatula
Medtr6g079630 2.0kb downstream 2.0kb downstream 2000 false chr6: 29059611-29061610 Medicago truncatula
Medtr6g079630 5.0kb upstream 5.0kb upstream 6091 true chr6: 29053520-29059610 Medicago truncatula
Medtr6g079630 5.0kb upstream 5.0kb upstream 5000 false chr6: 29053520-29058519 Medicago truncatula
Medtr6g079630 5.0kb downstream 5.0kb downstream 6091 true chr6: 29058520-29064610 Medicago truncatula
Medtr6g079630 5.0kb downstream 5.0kb downstream 5000 false chr6: 29059611-29064610 Medicago truncatula
Medtr6g079630 10.0kb upstream 10.0kb upstream 11091 true chr6: 29048520-29059610 Medicago truncatula
Medtr6g079630 10.0kb upstream 10.0kb upstream 10000 false chr6: 29048520-29058519 Medicago truncatula
Medtr6g079630 10.0kb downstream 10.0kb downstream 11091 true chr6: 29058520-29069610 Medicago truncatula
Medtr6g079630 10.0kb downstream 10.0kb downstream 10000 false chr6: 29059611-29069610 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299909 5265 Fabidae View MSA
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.449     High High
cufflinks 0.104        
cufflinks 0.145        
cufflinks 0.233        
cufflinks 0.118        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311        
cufflinks 0.119        
cufflinks 0.533        

0 Strain