Gene : Medtr6g081780 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11206//PTHR11206:SF173 - MULTIDRUG RESISTANCE PROTEIN Description:  MATE efflux family protein
Genomic Order:  3296 Name:  ? Medtr6g081780
Secondary Identifier:  ? PAC:31104178
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g081780 0.5kb upstream 0.5kb upstream 3902 true chr6: 30500586-30504487 Medicago truncatula
Medtr6g081780 0.5kb upstream 0.5kb upstream 500 false chr6: 30503988-30504487 Medicago truncatula
Medtr6g081780 0.5kb downstream 0.5kb downstream 3902 true chr6: 30500086-30503987 Medicago truncatula
Medtr6g081780 0.5kb downstream 0.5kb downstream 500 false chr6: 30500086-30500585 Medicago truncatula
Medtr6g081780 1.0kb upstream 1.0kb upstream 4402 true chr6: 30500586-30504987 Medicago truncatula
Medtr6g081780 1.0kb upstream 1.0kb upstream 1000 false chr6: 30503988-30504987 Medicago truncatula
Medtr6g081780 1.0kb downstream 1.0kb downstream 4402 true chr6: 30499586-30503987 Medicago truncatula
Medtr6g081780 1.0kb downstream 1.0kb downstream 1000 false chr6: 30499586-30500585 Medicago truncatula
Medtr6g081780 2.0kb upstream 2.0kb upstream 5402 true chr6: 30500586-30505987 Medicago truncatula
Medtr6g081780 2.0kb upstream 2.0kb upstream 2000 false chr6: 30503988-30505987 Medicago truncatula
Medtr6g081780 2.0kb downstream 2.0kb downstream 5402 true chr6: 30498586-30503987 Medicago truncatula
Medtr6g081780 2.0kb downstream 2.0kb downstream 2000 false chr6: 30498586-30500585 Medicago truncatula
Medtr6g081780 5.0kb upstream 5.0kb upstream 8402 true chr6: 30500586-30508987 Medicago truncatula
Medtr6g081780 5.0kb upstream 5.0kb upstream 5000 false chr6: 30503988-30508987 Medicago truncatula
Medtr6g081780 5.0kb downstream 5.0kb downstream 8402 true chr6: 30495586-30503987 Medicago truncatula
Medtr6g081780 5.0kb downstream 5.0kb downstream 5000 false chr6: 30495586-30500585 Medicago truncatula
Medtr6g081780 10.0kb upstream 10.0kb upstream 13402 true chr6: 30500586-30513987 Medicago truncatula
Medtr6g081780 10.0kb upstream 10.0kb upstream 10000 false chr6: 30503988-30513987 Medicago truncatula
Medtr6g081780 10.0kb downstream 10.0kb downstream 13402 true chr6: 30490586-30503987 Medicago truncatula
Medtr6g081780 10.0kb downstream 10.0kb downstream 10000 false chr6: 30490586-30500585 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303987 5265 Fabidae View MSA
124062797 5270 Rosid View MSA
123744234 5271 Pentapetalae View MSA
122796569 5272 Eudicot View MSA
122043980 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176        
cufflinks 0.015     Low Low
cufflinks 0.064     Low  
cufflinks 0.11        
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.274       High
cufflinks 0.027     Low  
cufflinks 0.277       High

0 Strain