Gene : Medtr6g080430 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33414:SF2 - PLASTID MOVEMENT IMPAIRED1 Description:  plastid movement impaired protein
Genomic Order:  3277 Name:  ? Medtr6g080430
Secondary Identifier:  ? PAC:31102875
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g080430 0.5kb upstream 0.5kb upstream 3292 true chr6: 30342282-30345573 Medicago truncatula
Medtr6g080430 0.5kb upstream 0.5kb upstream 500 false chr6: 30345074-30345573 Medicago truncatula
Medtr6g080430 0.5kb downstream 0.5kb downstream 3292 true chr6: 30341782-30345073 Medicago truncatula
Medtr6g080430 0.5kb downstream 0.5kb downstream 500 false chr6: 30341782-30342281 Medicago truncatula
Medtr6g080430 1.0kb upstream 1.0kb upstream 3792 true chr6: 30342282-30346073 Medicago truncatula
Medtr6g080430 1.0kb upstream 1.0kb upstream 1000 false chr6: 30345074-30346073 Medicago truncatula
Medtr6g080430 1.0kb downstream 1.0kb downstream 3792 true chr6: 30341282-30345073 Medicago truncatula
Medtr6g080430 1.0kb downstream 1.0kb downstream 1000 false chr6: 30341282-30342281 Medicago truncatula
Medtr6g080430 2.0kb upstream 2.0kb upstream 4792 true chr6: 30342282-30347073 Medicago truncatula
Medtr6g080430 2.0kb upstream 2.0kb upstream 2000 false chr6: 30345074-30347073 Medicago truncatula
Medtr6g080430 2.0kb downstream 2.0kb downstream 4792 true chr6: 30340282-30345073 Medicago truncatula
Medtr6g080430 2.0kb downstream 2.0kb downstream 2000 false chr6: 30340282-30342281 Medicago truncatula
Medtr6g080430 5.0kb upstream 5.0kb upstream 7792 true chr6: 30342282-30350073 Medicago truncatula
Medtr6g080430 5.0kb upstream 5.0kb upstream 5000 false chr6: 30345074-30350073 Medicago truncatula
Medtr6g080430 5.0kb downstream 5.0kb downstream 7792 true chr6: 30337282-30345073 Medicago truncatula
Medtr6g080430 5.0kb downstream 5.0kb downstream 5000 false chr6: 30337282-30342281 Medicago truncatula
Medtr6g080430 10.0kb upstream 10.0kb upstream 12792 true chr6: 30342282-30355073 Medicago truncatula
Medtr6g080430 10.0kb upstream 10.0kb upstream 10000 false chr6: 30345074-30355073 Medicago truncatula
Medtr6g080430 10.0kb downstream 10.0kb downstream 12792 true chr6: 30332282-30345073 Medicago truncatula
Medtr6g080430 10.0kb downstream 10.0kb downstream 10000 false chr6: 30332282-30342281 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310064 5265 Fabidae View MSA
124066768 5270 Rosid View MSA
123738803 5271 Pentapetalae View MSA
122793466 5272 Eudicot View MSA
122045060 5273 Angiosperm View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.3        
cufflinks 16.845     High  
cufflinks 10.237     High  
cufflinks 0.136        
cufflinks 14.239     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 14.943     High  
cufflinks 0.013     Low Low

0 Strain