Gene : Medtr6g080170 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR14226 - NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER Description:  triacylglycerol lipase SDP1
Genomic Order:  3268 Name:  ? Medtr6g080170
Secondary Identifier:  ? PAC:31102598
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPAS-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g080170 0.5kb upstream 0.5kb upstream 3876 true chr6: 30136457-30140332 Medicago truncatula
Medtr6g080170 0.5kb upstream 0.5kb upstream 500 false chr6: 30139833-30140332 Medicago truncatula
Medtr6g080170 0.5kb downstream 0.5kb downstream 3876 true chr6: 30135957-30139832 Medicago truncatula
Medtr6g080170 0.5kb downstream 0.5kb downstream 500 false chr6: 30135957-30136456 Medicago truncatula
Medtr6g080170 1.0kb upstream 1.0kb upstream 4376 true chr6: 30136457-30140832 Medicago truncatula
Medtr6g080170 1.0kb upstream 1.0kb upstream 1000 false chr6: 30139833-30140832 Medicago truncatula
Medtr6g080170 1.0kb downstream 1.0kb downstream 4376 true chr6: 30135457-30139832 Medicago truncatula
Medtr6g080170 1.0kb downstream 1.0kb downstream 1000 false chr6: 30135457-30136456 Medicago truncatula
Medtr6g080170 2.0kb upstream 2.0kb upstream 5376 true chr6: 30136457-30141832 Medicago truncatula
Medtr6g080170 2.0kb upstream 2.0kb upstream 2000 false chr6: 30139833-30141832 Medicago truncatula
Medtr6g080170 2.0kb downstream 2.0kb downstream 5376 true chr6: 30134457-30139832 Medicago truncatula
Medtr6g080170 2.0kb downstream 2.0kb downstream 2000 false chr6: 30134457-30136456 Medicago truncatula
Medtr6g080170 5.0kb upstream 5.0kb upstream 8376 true chr6: 30136457-30144832 Medicago truncatula
Medtr6g080170 5.0kb upstream 5.0kb upstream 5000 false chr6: 30139833-30144832 Medicago truncatula
Medtr6g080170 5.0kb downstream 5.0kb downstream 8376 true chr6: 30131457-30139832 Medicago truncatula
Medtr6g080170 5.0kb downstream 5.0kb downstream 5000 false chr6: 30131457-30136456 Medicago truncatula
Medtr6g080170 10.0kb upstream 10.0kb upstream 13376 true chr6: 30136457-30149832 Medicago truncatula
Medtr6g080170 10.0kb upstream 10.0kb upstream 10000 false chr6: 30139833-30149832 Medicago truncatula
Medtr6g080170 10.0kb downstream 10.0kb downstream 13376 true chr6: 30126457-30139832 Medicago truncatula
Medtr6g080170 10.0kb downstream 10.0kb downstream 10000 false chr6: 30126457-30136456 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313566 5265 Fabidae View MSA
124066433 5270 Rosid View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain