Gene : Medtr6g080130 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  3264 Name:  ? Medtr6g080130
Secondary Identifier:  ? PAC:31105452
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g080130 0.5kb upstream 0.5kb upstream 1109 true chr6: 30126608-30127716 Medicago truncatula
Medtr6g080130 0.5kb upstream 0.5kb upstream 500 false chr6: 30127217-30127716 Medicago truncatula
Medtr6g080130 0.5kb downstream 0.5kb downstream 1109 true chr6: 30126108-30127216 Medicago truncatula
Medtr6g080130 0.5kb downstream 0.5kb downstream 500 false chr6: 30126108-30126607 Medicago truncatula
Medtr6g080130 1.0kb upstream 1.0kb upstream 1609 true chr6: 30126608-30128216 Medicago truncatula
Medtr6g080130 1.0kb upstream 1.0kb upstream 1000 false chr6: 30127217-30128216 Medicago truncatula
Medtr6g080130 1.0kb downstream 1.0kb downstream 1609 true chr6: 30125608-30127216 Medicago truncatula
Medtr6g080130 1.0kb downstream 1.0kb downstream 1000 false chr6: 30125608-30126607 Medicago truncatula
Medtr6g080130 2.0kb upstream 2.0kb upstream 2609 true chr6: 30126608-30129216 Medicago truncatula
Medtr6g080130 2.0kb upstream 2.0kb upstream 2000 false chr6: 30127217-30129216 Medicago truncatula
Medtr6g080130 2.0kb downstream 2.0kb downstream 2609 true chr6: 30124608-30127216 Medicago truncatula
Medtr6g080130 2.0kb downstream 2.0kb downstream 2000 false chr6: 30124608-30126607 Medicago truncatula
Medtr6g080130 5.0kb upstream 5.0kb upstream 5609 true chr6: 30126608-30132216 Medicago truncatula
Medtr6g080130 5.0kb upstream 5.0kb upstream 5000 false chr6: 30127217-30132216 Medicago truncatula
Medtr6g080130 5.0kb downstream 5.0kb downstream 5609 true chr6: 30121608-30127216 Medicago truncatula
Medtr6g080130 5.0kb downstream 5.0kb downstream 5000 false chr6: 30121608-30126607 Medicago truncatula
Medtr6g080130 10.0kb upstream 10.0kb upstream 10609 true chr6: 30126608-30137216 Medicago truncatula
Medtr6g080130 10.0kb upstream 10.0kb upstream 10000 false chr6: 30127217-30137216 Medicago truncatula
Medtr6g080130 10.0kb downstream 10.0kb downstream 10609 true chr6: 30116608-30127216 Medicago truncatula
Medtr6g080130 10.0kb downstream 10.0kb downstream 10000 false chr6: 30116608-30126607 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315297 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain