Gene : Medtr6g046630 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR13937:SF0 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C-RELATED Description:  eukaryotic translation initiation factor 3c
Genomic Order:  2027 Name:  ? Medtr6g046630
Secondary Identifier:  ? PAC:31103093
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g046630 0.5kb upstream 0.5kb upstream 3493 true chr6: 16872066-16875558 Medicago truncatula
Medtr6g046630 0.5kb upstream 0.5kb upstream 500 false chr6: 16872066-16872565 Medicago truncatula
Medtr6g046630 0.5kb downstream 0.5kb downstream 3493 true chr6: 16872566-16876058 Medicago truncatula
Medtr6g046630 0.5kb downstream 0.5kb downstream 500 false chr6: 16875559-16876058 Medicago truncatula
Medtr6g046630 1.0kb upstream 1.0kb upstream 3993 true chr6: 16871566-16875558 Medicago truncatula
Medtr6g046630 1.0kb upstream 1.0kb upstream 1000 false chr6: 16871566-16872565 Medicago truncatula
Medtr6g046630 1.0kb downstream 1.0kb downstream 3993 true chr6: 16872566-16876558 Medicago truncatula
Medtr6g046630 1.0kb downstream 1.0kb downstream 1000 false chr6: 16875559-16876558 Medicago truncatula
Medtr6g046630 2.0kb upstream 2.0kb upstream 4993 true chr6: 16870566-16875558 Medicago truncatula
Medtr6g046630 2.0kb upstream 2.0kb upstream 2000 false chr6: 16870566-16872565 Medicago truncatula
Medtr6g046630 2.0kb downstream 2.0kb downstream 4993 true chr6: 16872566-16877558 Medicago truncatula
Medtr6g046630 2.0kb downstream 2.0kb downstream 2000 false chr6: 16875559-16877558 Medicago truncatula
Medtr6g046630 5.0kb upstream 5.0kb upstream 7993 true chr6: 16867566-16875558 Medicago truncatula
Medtr6g046630 5.0kb upstream 5.0kb upstream 5000 false chr6: 16867566-16872565 Medicago truncatula
Medtr6g046630 5.0kb downstream 5.0kb downstream 7993 true chr6: 16872566-16880558 Medicago truncatula
Medtr6g046630 5.0kb downstream 5.0kb downstream 5000 false chr6: 16875559-16880558 Medicago truncatula
Medtr6g046630 10.0kb upstream 10.0kb upstream 12993 true chr6: 16862566-16875558 Medicago truncatula
Medtr6g046630 10.0kb upstream 10.0kb upstream 10000 false chr6: 16862566-16872565 Medicago truncatula
Medtr6g046630 10.0kb downstream 10.0kb downstream 12993 true chr6: 16872566-16885558 Medicago truncatula
Medtr6g046630 10.0kb downstream 10.0kb downstream 10000 false chr6: 16875559-16885558 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122265558 5265 Fabidae Singleton cluster - no MSA
124038973 5270 Rosid View MSA
123748906 5271 Pentapetalae View MSA
122796222 5272 Eudicot View MSA
122042650 5273 Angiosperm View MSA
121345410 5274 Embryophyte View MSA
123424846 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain